Panthera tigris altaica (Amur tiger): 102972338
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Entry
102972338 CDS
T02988
Symbol
TPR
Name
(RefSeq) translocated promoter region, nuclear basket protein
KO
K09291
nucleoprotein TPR
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03013
Nucleocytoplasmic transport
ptg05014
Amyotrophic lateral sclerosis
ptg05200
Pathways in cancer
ptg05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102972338 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102972338 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
102972338 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102972338 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102972338 (TPR)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102972338 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
YwqH-like
Imm70
Motif
Other DBs
NCBI-GeneID:
102972338
NCBI-ProteinID:
XP_015399265
LinkDB
All DBs
Position
Un
AA seq
2362 aa
AA seq
DB search
MAGLLPLQARFLRTTSLMASLPCAASPSLAVLTVCAHVCFIFFFLCSSEEQQYFEIEKRL
SHSQERLVNETRECQSLRLELEKLNNQLKALTEKNKELEVAQDRNIAIQSQFTRTKEELE
AEKRDLVRTNERLSQELEYLTEDFKRLNEKLKESNATKGDLQLKLDELQASDVSVKYREK
RLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVSRMEEQMN
GLKMSNENLQKHVEELLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSN
ELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMEKEMLEKIGKLEKELENANDLLS
ATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRINK
YLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKANKHSSV
LERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYR
NIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLKLENALTELEQLRESRQHQM
QLVDSIVRQRDMYRILLSQTTGVAIPLQASSLDDISLASTPKRSSTSQTASTPAPVPVIE
SAEAIEAKAALKQLQEIFENYKKEKADNEKIQNEQLEKLQDQITDLRSQNTKISTQLDFA
SKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRA
ENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSGQI
EKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHHNTKELLKNAQKEI
ATLKQHLSNMEVQLASQSSQRTGKGQPNNKEDVDDLLSQLRQAEEQVNDLKERLKTSTSN
VEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDD
KRKAIESMEQQLSELKKTLNSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNK
YERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQLLECKASWEERERMLKDE
VSKCVSRCEDLEKQNRLLHDQIEKLSDKVVASVKEGVQGPLNVSLSEEGKSQEQILEILR
FIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEE
LMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGML
QAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKAE
IARSNASLTNNQNLIQSLKEDLNKVRTEKETIQKDLDAKIIDIQEKVKTITQVKKIGRRY
KTQYEELKAQQDKAMETSAQSSGDHQEQHVSVQEMQELKETLNQAETKSKSLESQVENLQ
KTLSEKETEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAAK
SKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREHQ
ERHLEQRDEPQEPTTKVPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTPSKV
TAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPVF
GSASGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHPQIEPANQELSPNIVEVV
QSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASDQVSDDTVEMPLPKKLKS
VTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDLG
PLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHEDYEEDEEDEDDDEDDTGM
GDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGESNQRAADSQNSGEGN
AGTAEPSFSQDISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRI
QMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGV
PRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAP
VTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGDEVFVEAESEGISSEAGL
EIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQF
NRQRGVSHAMGGRGGINRGNIN
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcttctccccttgcaagctcgctttctgcgtacgacttcgctgatggcatcg
cttccctgtgctgcctcgccctccttagcagtattgacagtatgtgcacatgtgtgtttc
attttttttttcctctgctcttctgaagaacaacaatactttgagatagagaagaggctg
tcccacagtcaggagaggcttgtgaatgaaacccgagagtgccaaagcttgaggcttgag
ctcgagaagctcaacaatcaactgaaggcactaactgagaaaaataaagaacttgaagtt
gctcaggatcgcaatattgccattcagagccagtttacaaggacaaaagaagaattagaa
gctgagaaaagagacttagttagaaccaatgagagactatctcaagaacttgaatattta
acagaggattttaaacgtctaaatgaaaaacttaaagaaagcaatgccacaaagggtgat
cttcagttaaaactggatgaacttcaagcttctgatgtttctgttaaatatcgagaaaaa
cgtttggagcaagaaaaggagttattacataatcagaatacatggctgaatacagagttg
aaaactaaaactgatgaacttctggctcttggcagagaaaaaggaaatgagattctagag
cttaaatgtaatcttgaaaacaaaaaagaagaggtttccagaatggaagaacagatgaat
ggcttgaagatgtcaaatgagaatcttcaaaaacatgtagaagagctgttgaccaaacta
aaagaggccaaggaacagcaggccagtatggaagagaaattccacaatgaattaaatgct
cacataaaactctctaatctatacaagagtgctgctgatgactccgaggcaaagagcaat
gaactgacccgagcagtagatgaactgcacaaacttttgaaagaagctggagaagccaat
aaagcaattcaagatcatcttctagaagtggaggaatctaaagatcaaatggaaaaagaa
atgcttgagaaaataggaaagttggagaaggaattagagaatgcaaatgacctgctttct
gccacaaaacgtaaaggagccatattatctgaagaagaacttgcagccatgtctcctact
gcagcagctgtagctaagatagtgaagcctggcatgaaattaactgagctgtataatgct
tatgtggaaactcaggatcagttgcttttggagaaactagagaataaaagaattaataaa
tatctagatgaaatagtgaaagaagttgaagctaaagcaccaattttgaaacgccagcgt
gaggagtatgaacgtgctcagaaagctgtggcaagtttatctgttaagcttgaacaagct
atgaaggagattcaacgattgcaggaggacactgataaagctaacaaacattcatctgtg
cttgaaagagacaatcaaagaatggaaatacaaataaaagatctttcacaacagattaga
gtgcttttgatggaacttgaggaagcaaggggtaatcatgtaattcgtgatgaggaagtg
agctccgctgatataagtagttcatctgaagtaatatcacagcatctagtatcttataga
aatattgaagaacttcaacagcaaaatcaacgtctcttagtggcccttagggaacttggg
gaaaccagagaaagagaggaacaagaaacaacttcatccaaaatcactgagctgcagcta
aaacttgagaatgccctcactgaattagaacaactccgggagtcacgacaacatcaaatg
cagcttgttgattctatagttcgtcagcgtgatatgtaccgtattttgttgtcgcaaaca
acaggagttgccattcctttacaagcttcaagtttagatgatatttctcttgcatcaact
ccgaaacgttcaagtacatcacagactgcttccactcctgctccagtacctgtaattgag
tcagcagaggctatagaagcaaaggctgctcttaaacagttgcaggaaatttttgagaat
tacaagaaagaaaaggcagataatgaaaaaatacaaaatgagcagcttgagaaacttcag
gatcaaattacagatttgcgatcacaaaacaccaaaatatctacacaactagattttgct
tctaaacgttatgaaatgttacaagataatgttgaaggatatcgtcgagaaataacatcc
ctacatgagagaaatcagaaacttactgcaacaactcaaaagcaggaacagattatcaat
acaatgacgcaagatttgagaggagcaaatgaaaagctggctgttgcagaagtaagagca
gaaaacttgaaaaaggaaaaggagatgcttaaattgtccgaagtccgcctttctcaacaa
agagagtctttgttagccgaacaaagagggcaaaacttgctgctgactaacctgcaaaca
attcagggaatattagagcgatctgaaacggaaaccaaacaaaggcttagtggccagata
gaaaaactggaacatgagatatctcatctaaagaagaagttggaaaatgaggtggaacaa
aggcatacacttactagaaatctagatgttcaacttttggatacaaaaagacaactggat
actgagacaaatcttcatcataacacaaaagaactattaaaaaatgctcaaaaggaaatt
gctacattaaaacagcacctcagtaatatggaagttcagcttgcttctcagtcctcacag
agaactggcaaaggtcagcctaacaacaaagaagatgtggatgatcttctgagtcagcta
aggcaagcagaagagcaggtgaatgatttgaaggagagactcaaaacaagtactagtaat
gtggaacagtatcgagcaatggttactagtttagaagaatctcttaacaaggaaaaacag
gtgacagaagaagtacgtaagaatattgaagttcgtttaaaagagtcagctgagtttcag
acacagttggaaaagaagttgatggaagtagagaaggaaaaacaggaacttcaggatgat
aagagaaaagccatagaaagtatggaacaacagttatctgagttaaagaaaacacttaac
agcgttcagaatgaagtacaagaagctcttcagagagcaagcacagctttgagtaatgaa
cagcaagccagacgtgactgtcaggaacaagctaaaatagctgtggaagctcagaataag
tatgagagagaattgatgctccatgctgctgatgttgaagctctacaagctgccaaggaa
caggtttccaaaatggcatcagtccgtcagcatttggaagaaacaacccagaaagcagaa
tcacagttattggagtgcaaagcatcttgggaagaaagagaaagaatgttaaaggatgaa
gtttccaagtgtgtgtctcgctgtgaagatctagagaaacaaaaccgattacttcatgat
caaattgaaaaattaagtgacaaggttgttgcctctgtgaaggaaggtgtacagggtccc
ttaaatgtctctctaagtgaagaaggaaaatctcaagaacaaattttagaaattctcaga
tttatacgacgagaaaaagaaattgctgaaaccaggtttgaggtggctcaggttgagagt
ctgcgttatcgtcaaagagttgaacttttagaaagagagctgcaggaactgcaggatagt
ctcaatgctgaaagagagaaagtccaggtaactgcaaaaacaatggctcagcatgaagaa
ctgatgaagaaaaccgaaacaatgaatgtagtgatggagaccaataagatgctaagagaa
gaaaaagagaggctagaacaggatttacagcagatgcaagcaaaggtaaggaaactggag
ttagatattttacccttacaagaagcaaatgctgagctgagtgagaaaagcggtatgttg
caagcagagaagaagttactagaagaagatgtcaaacgttggaaagcacgtaaccagcat
ctagtaagtcaacagaaagatccagatacagaagaatatcggaagctcctttctgaaaag
gaagttcatactaagcgtatccagcagttgactgaagaaattgggagacttaaagcggaa
attgcaagatcaaatgcatctttgacgaacaaccagaacttaatccagagtctaaaggaa
gacttaaataaagtaagaactgaaaaggaaaccatccaaaaggacttagatgccaaaata
attgacatccaggaaaaagtcaaaactattactcaagtcaagaagattgggcgtagatac
aagactcagtatgaagaacttaaagcacaacaggataaggccatggagacctcggctcaa
tcttctggagaccaccaggaacagcatgtctcagtccaggaaatgcaggagctcaaagaa
accctcaatcaagctgaaacaaagtcaaaatcactggagagtcaagtagagaatctgcag
aagacattatctgaaaaagagacagaagcaagaaatctgcaggaacagactgtgcagctt
cagtctgagctttcacgactccgccaggatcttcaagatagaaccacacaagaggagcaa
ctccgacagcagataactgaaaaggaagaaaaaacaagaaaggccattgtagcagcaaaa
tcaaaaattgcgcatttagctggtgtaaaagatcagctaactaaagaaaatgaggagctt
aaacaaaggaatggagccttagatcagcagaaagatgaattggatgttcgaatgactgct
cttaagtcccagtatgaaggtcgaattagtcgcttggaaagagaactccgggagcatcaa
gagagacaccttgagcagagagatgagcctcaagaacctactactaaggtcccagaacag
cagaggcagatcacattgaaaacaactccagcttctggtgaaagaggaattgccagcaca
tcagacccaccaacagccaatatcaagccaactcctgttgtgtctactccaagtaaagtg
acagctgcagctatggctgggaataagtcaacacccagggctagtatccgcccaatggtc
acacctgcaactgttacaaatcctactacaaccccaacagctacagtgatgcccactaca
caagtggaatcacaggaagcgatgcagtcagaagggcctgtggaacatgttccagtgttt
ggaagtgcaagtggttctgttcgttctactagtcctaatgtccagccttcaatccctcaa
cccattttaaccgttcagcaacaaacgcaggctacagcttttgtgcaacccacccagcag
agtcatcctcagatagagcctgcaaatcaagagctgtcccccaacatagtagaagttgta
cagagttcaccagttgagcggccttctacttccacagcagtatttggcactgtttcggct
accccaagttcttctttgcctaaacggacacgtgaagaggaagaggatagcaccatagaa
gcatcagaccaagtctctgatgataccgtggaaatgcctcttccaaagaagttgaaaagt
gttacccctgtaggaactgaggaagaagttatggcagaagaaagtactgatggagaggta
gagactcaagtatacaaccaagattctcaagattccattggagaaggagttacccaggga
gattatactccgatggaagacagtgaagaaacctctcagtctctacaaatagaccttgga
ccccttcagtcagatcagcaaacgacaacttcatcccaagatggtcaaggcaaaggagat
gatgtcattgtaattgacagtgacgatgaagaagaggatgatgatgaaaatgatggagaa
catgaggattatgaagaagatgaggaagacgaggatgatgatgaggatgacacagggatg
ggagatgagggtgaagatagtaacgaaggcactggtagcgcagatggcaatgatggatat
gaagctgatgatgctgagggtggtgatggaactgatccaggtacagaaacagaagaaagt
atgggtggaggtgaaagtaatcagagagctgctgattctcagaacagtggtgaaggcaat
gcaggtactgcggagccatctttttcccaggacatttctagagaacaacagccatcatca
gcatctgaaagacagactcctcgagcacctcagtctccgagacgccctccacaccctctg
cccccacgcctgaccattcatgctccacctcaagaattgggaccaccagttcagagaatt
cagatgactcggaggcagtctgtaggacgtgggcttcagttgactccgggaataggtggc
atgcagcagcacttttttgatgatgaggacagaacagttcccagtactccaactcttgtg
gtaccacatcgcactgatggatttgctgaagcaattcactccccacaggttgctggtgtt
cctagattccggtttgggccacctgaagatatgccacagacaagttcaagtcactctgat
cttggccagcttgcttctcaaggaggtttaggaatgtatgaaacacccctcttcctagct
catgaagaagagtcaggtggccgaagtgttcccaccacacctctacaagtggcagcccct
gtgaccgtatttactgagagtaccacctctgatgcttcagagcacgcctctcagtcagtt
ccaatggtgacaacgtccactggtactttatccacaacaaatgaaacagcaacaggtgat
gatggagatgaagtatttgtggaggcagaatctgaaggtattagttcagaagcaggccta
gaaattgatagccagcaggaagaagaacctgttcaggcatctgatgagtcagatcttcct
tccaccagtcaggatcctccttccagttcttctgtagatactagcagtagtcaaccaaag
cctttcagacgagtaagacttcagacaacattgagacaaggtgtccgtggtcgtcagttt
aacagacagagaggtgtgagccatgcaatgggagggagaggaggaataaatagaggaaat
attaattaa
DBGET
integrated database retrieval system
