Panthera tigris altaica (Amur tiger): 107179522
Help
Entry
107179522 CDS
T02988
Name
(RefSeq) collagen alpha-1(XXV) chain-like
KO
K24356
collagen type XXV alpha
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
107179522
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptg00536
]
107179522
Glycosaminoglycan binding proteins [BR:
ptg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107179522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
107179522
NCBI-ProteinID:
XP_015392459
LinkDB
All DBs
Position
Un
AA seq
510 aa
AA seq
DB search
MEKECGLSFVKITKQHIHRTDREEKDAFNSPPGEKTSPSCSPSCGGGGFETSLGPLGPPG
QKGSVGMPGIPGVNGQKGEPGLPGTVGQNGIPGPKGEPGDRGEKGDAGESGPKGDTGEKG
DPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGE
RGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGALGPRGPPGQKGDQ
GATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEPGSPGIPGVDGEQGLKGS
KGDMGDPGMPGEKGGIGLPGLPGANGMKGEKGDSGLPGPQGPSIIGPPGPPGPHGPPGPM
GPHGLPGPKGEPGLNGVKGLKGEPGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPHGPA
GPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDVGEKGEKGFRGVKGEK
GEPGQPGLDGLDAPCQLGPDGLPMPGCWQK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaatgtggcctgtcttttgtgaagatcacaaagcagcacatccacagaact
gaccgagaggaaaaagatgccttcaacagccctcctggggagaaaacatcaccgagctgt
agtcctagctgtggtggaggtggctttgaaacatcgctgggtcctctggggcctccagga
caaaagggttctgttggaatgcctggaattccaggggtgaatggtcaaaagggtgagcct
gggttgcctggaacagtaggacaaaacggaataccagggccaaagggagaacccggagat
cgaggagaaaagggagatgctggagagagtggccccaaaggtgacacaggcgaaaagggt
gaccctggatcatctgcggcaggaattaagggggaacctggagaatctggtcgtccaggg
caaaagggtgaaccagggcttcctgggcttcctggacttccggggataaagggagaacca
ggtttcattggtcctcaaggagaaccaggcttaccagggttaccaggaacaaagggtgaa
cgtggggaagcagggcctcctggaagaggtgagcgaggggagcctggagcccctggacca
aaggggaaacaaggtgaatcaggaactagaggcccaaaggggtcaaagggtgatcgtgga
gagaaaggggactctggagccctgggaccaaggggtccacctggtcaaaagggagatcaa
ggagccactgagatcatagactacaatggcaacctccacgaagccttgcagaggattacc
accttaactgtcacgggtccccctggaccacctggacctcaaggactacaagggccaaag
ggagagccaggatctccaggaatcccaggagttgatggagagcagggacttaaaggctca
aagggagacatgggggacccaggtatgccaggtgaaaaaggaggaatcggacttcctgga
ttaccgggtgccaatggaatgaaaggagaaaaaggagactctggattaccaggtcctcag
ggtccttccatcataggcccaccaggcccaccaggcccccatggcccaccaggccccatg
ggacctcatggacttcctgggccaaagggtgaaccagggttaaatggtgttaaaggattg
aagggtgaaccaggtcaaaagggtgacagaggaccccttggtcttccaggagcatctggc
ttagacgggaagccaggatcccggggtacagatggccctatgggaccccatggccctgca
ggtcccaaaggagaaagaggtgaaaaaggagctatgggagagcctggacccagaggaccc
tatggtctgcctgggaaagatggagagcctggtcttgatggcttccctggtccacgaggc
gagaagggtgatgtaggagaaaagggggaaaagggattccgtggcgttaagggggaaaaa
ggggagccaggtcagcctggcctggatgggctggatgccccttgccaattggggccagat
ggattacctatgcctggctgttggcaaaagtga
DBGET
integrated database retrieval system