Pelotomaculum thermopropionicum: PTH_0904
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Entry
PTH_0904 CDS
T00519
Symbol
LigT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pth
Pelotomaculum thermopropionicum
Brite
KEGG Orthology (KO) [BR:
pth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pth03016
]
PTH_0904 (LigT)
Enzymes [BR:
pth01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PTH_0904 (LigT)
Transfer RNA biogenesis [BR:
pth03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PTH_0904 (LigT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
BAF59085
UniProt:
A5D3U3
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All DBs
Position
922579..923160
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AA seq
193 aa
AA seq
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MRQMRLFIAVNFPEQIKKALGAIIGELRQLPSDAKWVEEHNLHLTLQFLGNVPAEQVDSI
AAALGRSAAGVAPFRLNLNGVGVFPSRARPRVLWAGVSGETAVLSRLQHRVQTELGQLGF
PAEKRQFSPHLTLARFRSPAGFSAVMERAEEIVRGLDKFGSAVIDSVELMLSELGARGPS
YFVLARTPLSGKK
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagatgaggttgtttatagcggtaaactttccggaacagataaagaaggccctg
ggcgcgattatcggtgaattaaggcaactgccctccgacgccaaatgggtggaagagcac
aaccttcaccttacccttcaattccttggcaacgtgccggcggaacaggttgacagcatt
gccgctgctttaggccgctcggcggccggtgtggcgcctttcaggcttaatctgaacggg
gtgggggtttttccctcaagggccaggccaagagtgctctgggccggtgtttcgggcgaa
accgccgttttatcccggctgcagcacagggttcaaacagaactggggcagcttggcttt
ccggccgagaagaggcagttttcgccgcaccttactctggccaggttccgttccccggca
ggtttttccgccgtaatggagagggcggaggaaattgtccgcgggcttgataaattcggt
tcggctgtgattgattcggtggagttgatgttgagcgaactgggtgccagaggccccagt
tatttcgtgctggcccggacacccctgtcaggcaaaaaataa
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