Pelotomaculum thermopropionicum: PTH_1148
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Entry
PTH_1148 CDS
T00519
Symbol
FliA
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunit
KO
K03090
RNA polymerase sigma-B factor
Organism
pth
Pelotomaculum thermopropionicum
Brite
KEGG Orthology (KO) [BR:
pth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pth03021
]
PTH_1148 (FliA)
Transcription machinery [BR:
pth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PTH_1148 (FliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
HTH_28
LexA_DNA_bind
HTH_23
HTH_Crp_2
DUF7343
KORA
I-HmuI_NUMOD-like
HTH_37
HTH_3
HTH_1
UPF0122
Motif
Other DBs
NCBI-ProteinID:
BAF59329
UniProt:
A5D356
LinkDB
All DBs
Position
1185291..1186022
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AA seq
243 aa
AA seq
DB search
MLSPGPLGQKGCVQAGNIEAAMAAYLQDGSAESLQKVVEAGTRLVHYFVGLYAPGHSRED
LVQSGFEGLLKAAKRYDPGRGVSFSTYASHCIMGEVRHFIRKEASFSRPGWAAGLQERVN
RFLEEYLNEKGELPTLDQIAGAVNIRKEGLLQVMRVGWVAPDEIDVSKIRSQRYESFQLP
VEDRIVLRQAVEKLTELQRRVIAMLFFKNMTQGEAAEELGITQRKVSRVLHKSLKLLRDI
MSP
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgccggggcctctggggcaaaaagggtgtgtgcaggccgggaatattgaagcg
gccatggcggcatatttacaggacggcagtgccgagagcctgcaaaaagtggtggaggcc
ggcacgaggctggtccactatttcgtcggactctacgcgcccggccattccagggaggat
ctggttcagtccggctttgagggcctgctgaaggcggcaaaaaggtacgacccgggacgg
ggcgttagcttctccacttacgcctcgcactgcattatgggggaggtccgccactttatc
cgcaaggaggcctcctttagccgccccggctgggcggcagggctgcaggaaagggtgaac
cgctttctggaggaatatttaaatgaaaaaggcgaactgcccacgctggatcaaattgcc
ggggcggttaatatccggaaggaagggctgcttcaggtcatgcgggtgggctgggtggcg
ccggacgaaatagatgtgagcaagatccgcagccagcgctacgaaagctttcaattgccg
gtagaggaccgcatcgttctcaggcaggcggtggaaaagcttacggaactgcagcgcagg
gtaattgccatgcttttttttaaaaacatgacccagggcgaggcggccgaggaactggga
atcacccagcgcaaggtgtccagggtcctgcacaaaagcttaaagctgctgagggatatt
atgtccccgtga
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