Pelotomaculum thermopropionicum: PTH_1272
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Entry
PTH_1272 CDS
T00519
Symbol
TruB
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pth
Pelotomaculum thermopropionicum
Brite
KEGG Orthology (KO) [BR:
pth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pth03016
]
PTH_1272 (TruB)
Enzymes [BR:
pth01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PTH_1272 (TruB)
Transfer RNA biogenesis [BR:
pth03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PTH_1272 (TruB)
Prokaryotic type
PTH_1272 (TruB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BAF59453
UniProt:
A5D2S3
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All DBs
Position
1312557..1313507
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AA seq
316 aa
AA seq
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MNGIVNVLKPPGMSSHDVVDRIRRIFGVKKAGHTGTLDPGAAGVLVVCLGVATRLARFLL
GEDKEYRVEITFGMSTSTGDSYGEITDQRDASFLKEHDIIRVLPEFTGEVRQVPPMTSAI
KWRGKKLYELAREGLVVERQERAVYIKSLEFIRGSGWGTPSPRALMHLSCSKGTYVRSLC
HDMGSRLGCGAHMSFLVRTRAGPFKIADSVTLEELQAAASKGVLERKIIEMDRAVSEYPE
VIVKSSAVKAVAAGSKLYIPGVARMPLDLDCGKLVRLTGPDGLLAIAEAGREPFDKEKLF
FKPVCVLARQAGRSSN
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcattgttaatgtgttaaaacctccgggcatgtcttcacacgatgtggttgac
aggatccgccgcatttttggagtaaaaaaagcaggtcacacaggtacgctagatcccggc
gcggcaggcgtactggtggtttgcctgggagttgccaccagactggcgcggttcctgcta
ggcgaagataaagaataccgcgtggaaataacatttggaatgagcacctcaaccggcgat
tcttatggggaaataacggatcaaagggatgcttcatttctaaaggagcatgacattatc
cgtgttttacccgagttcaccggagaagtcaggcaggtgccgccgatgacctctgcgatt
aaatggcggggcaaaaaactgtacgaacttgccagggaaggtctggtcgtggagcgtcag
gaaagagccgtttacataaagtctctggaatttatccggggaagcggttggggcaccccc
agtccgagggcgcttatgcacttatcctgctccaaggggacgtatgtcaggtcgctttgc
cacgatatgggcagccgcctgggctgcggagcgcatatgtcctttttggtaagaaccagg
gcaggtccatttaagattgccgattcggttaccctggaagagcttcaagcagcagcatcg
aagggggtgctggagcggaaaattattgaaatggacagggcggtatcggagtatccagaa
gtgattgtaaaaagcagtgcagttaaagctgttgcagcaggttcgaaattatacataccg
ggagtcgccagaatgcccctggatctggattgcggcaaactggttcgcctgaccgggccg
gatggactgctggcgatagcggaggccggacgcgagccatttgataaagaaaagcttttt
tttaaaccggtttgcgttctggcgaggcaggcagggaggtcgtcgaattga
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