Pelotomaculum thermopropionicum: PTH_1345
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Entry
PTH_1345 CDS
T00519
Symbol
Hfq
Name
(GenBank) Uncharacterized host factor I protein
KO
K03666
host factor-I protein
Organism
pth
Pelotomaculum thermopropionicum
Pathway
pth02024
Quorum sensing
pth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PTH_1345 (Hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PTH_1345 (Hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pth03019
]
PTH_1345 (Hfq)
03036 Chromosome and associated proteins [BR:
pth03036
]
PTH_1345 (Hfq)
Messenger RNA biogenesis [BR:
pth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PTH_1345 (Hfq)
Chromosome and associated proteins [BR:
pth03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PTH_1345 (Hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
BAF59526
UniProt:
A5D2K8
LinkDB
All DBs
Position
1389974..1390225
Genome browser
AA seq
83 aa
AA seq
DB search
MTKPQINLQDAFLNQVRKENIPVTIFLVNGFQLKGMVRGFDNFTVILESEGKQLMVYKHA
ISTVSPLKPVSTSFSEAKAPEKS
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaccccagattaacctccaggatgcctttttaaaccaggtaagaaaggaaaac
atccctgttaccattttccttgttaacggctttcaattaaagggaatggtgaggggcttt
gataattttacggtgattttagaaagtgaaggcaagcagttgatggtctacaagcatgca
atttccaccgtaagcccgttgaagcctgtaagcacttctttttctgaagccaaggcacca
gaaaagtcctga
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