Pelotomaculum thermopropionicum: PTH_1518
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Entry
PTH_1518 CDS
T00519
Symbol
TrmA
Name
(GenBank) SAM-dependent methyltransferases
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pth
Pelotomaculum thermopropionicum
Brite
KEGG Orthology (KO) [BR:
pth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pth03009
]
PTH_1518 (TrmA)
Enzymes [BR:
pth01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PTH_1518 (TrmA)
Ribosome biogenesis [BR:
pth03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PTH_1518 (TrmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_25
MTS
Methyltransf_15
PrmA
Methyltransf_11
SGNH
Ral
Motif
Other DBs
NCBI-ProteinID:
BAF59699
UniProt:
A5D234
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All DBs
Position
1581422..1582834
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AA seq
470 aa
AA seq
DB search
MTAGQSFPVQKNERIVLQISGINHSGEGVGRYRGLAVFVPGAAPGDQVVAEVSDVKKNYA
RARLLGIKTASPARREPECGRFSRCGGCRLQHINYGEQLMLKTILVKDSLARIAGLEKVK
VRAAAGMEHPWHYRNKVHFQVEERPDKIALGFYEEGTHNLTAFFNEGACPGTGCLLVDDE
LNKLAALIEKLLNRHRGPFGRRILPQKRQSRFFRHIVLRKGFFTGEVMAVLVTGSGEWPG
EKAFVKELLSLRPGLVSLVRNINDGPPGVLFGKKSRCLAGREHIKDRLGHLIFRISPSSF
YQVNPVQTLVLYNKVQQYAALTGRETVVDAYSGIGSIALFLAGRAKRVYGLEALPDAVAD
ARKNAALNKITNAEFLTGKVESLIPILAAQGQRPEVVVLDPPRHGCGREVLEAVVQMQVP
RLVYVSCNPATLARDLRYFADNGYLVDEVQPVDMFPWTAHVECVVLMSRL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacggccggccaaagctttcccgtacaaaaaaatgaaaggattgttttacaaataagc
ggtataaatcattccggggaaggggtgggacgttaccggggcctggccgtgtttgtccct
ggcgcagcaccaggggaccaggtggtagccgaggtttccgacgtcaagaaaaattacgcc
cgggcccgcctgctggggataaaaacggcctccccggccagacgggagccggagtgcggc
cgtttttccagatgcgggggctgccgcctgcagcatataaactacggggagcaattgatg
ctgaaaacaatcctggttaaggacagcctggcccgcatagccggcctggaaaaggttaag
gtcagggctgcagccggaatggagcacccctggcattaccggaacaaggtccattttcag
gtagaagagcgccccgataaaatagctttgggtttttacgaagagggcactcacaacctg
accgcctttttcaatgaaggtgcttgtccaggtacaggctgcctgctggtagacgacgaa
cttaacaaactggccgcactgattgaaaagctgcttaaccggcacagggggccctttggc
cggcgcatcctcccgcaaaaacggcaatcccggtttttccggcacattgtcttgcgcaaa
ggctttttcaccggcgaggtaatggccgtgctggttaccggcagcggagaatggcccggt
gaaaaagcctttgtgaaggaattgctgtccttgcggccgggcctcgtctccctggtgcgc
aacatcaacgacgggccgccgggcgtgctcttcggaaagaaaagccgctgcctggccgga
cgggagcacatcaaagaccgcctgggacacctcatctttcgcatatccccgtcttccttt
taccaggtcaaccctgtgcaaactctggtgctgtacaataaggtgcagcagtacgcggcg
ctgaccggcagggagacggtggtggacgcttatagcggcatcggctccattgccctgttt
ctggccggccgggcgaaaagggtgtacggactggaagcattgcctgacgctgtggcggac
gcccggaaaaatgccgccttgaataagataacaaatgctgagtttttgaccggtaaagtg
gaaagtctcattcccatcctggccgcgcagggtcagcggccggaagtggtggtgctggac
ccgccccggcacggctgtggccgggaggtcctggaggcggtggtacagatgcaggtgccg
cggcttgtttacgtttcctgcaaccctgctacgctggcacgtgacctccgctactttgca
gataacggttacctggtagacgaggtccagccggtggatatgtttccctggacggcgcac
gtggagtgcgtggtattgatgtcaaggttgtaa
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