Pelotomaculum thermopropionicum: PTH_1939
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Entry
PTH_1939 CDS
T00519
Name
(GenBank) mismatch repair ATPase
KO
K07456
DNA mismatch repair protein MutS2
Organism
pth
Pelotomaculum thermopropionicum
Pathway
pth03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PTH_1939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pth03400
]
PTH_1939
DNA repair and recombination proteins [BR:
pth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PTH_1939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
ZMYND11_CC
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAF60120
UniProt:
A5D0W6
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Position
complement(2053156..2055513)
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AA seq
785 aa
AA seq
DB search
MDKKALKRLEYHKVLEQLAACSGSSLGREKIMAMEPLDNLQAILRKQEETSEGRKLLRLE
PFAEAGGWKDIRAQLRKAGQGAILDPEELLAVADTLTAGRTIRKFFQDRQEQYPLLYEVS
SALVSLPELERKIKNAILPGGEVADGASPELAQIRRRLAAAQAQVKEHLEHIIRSPSYQK
YLQEPIVTIREGRYVVPVKIEHRSQVPGIVHDQSASGATLFIEPMAVVEKNNELRRLMAA
EKREIQRILAELSAGVAQHAGPIGASLEALGELDFIMARARYSQKLDAWAPLLEGEACMD
IRRGRHPLLQGEVVPIDIRLGADFDTLVITGPNTGGKTVALKTAGLLVLMAQSGLHIPAG
EGSRLGIFRQVFADIGDEQSIEQSLSTFSSHMNNIVEIIGKAGPDSLVLLDELGAGTDPA
EGAALAQSILEKLHSAGAKTVATTHYGELKDFALTRERVENASVEFDAITLRPTYRLLIG
KPGRSNAFEIAARLGLPEEVVKRARSFLTAEHIQAEELMRSLEKTQQEAEAERRRAAELA
SEARALKERYEKIEADLASKRESILSKAAEEAQALVRAARLEAEAAVRELREKMAEEAAR
ERENAIREAREKLRKLQQRVGRAVPEKTVPGEAPAGLRPGEEVFLTRYNQKGYVLEPPGA
GGEVLVQVGVIKMNVPLRELRRVKEARPAGGQSEVAGVLLNKAREISPELDLRGLYADEA
LLEVEKYLDDAYLAGLSRVYLIHGKGTGSLRAAIHRQLSGHRRVKSFRLGEHGEGGLGVT
VVELA
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaaggcgctgaagaggctggagtatcataaagtgctcgaacagcttgccgcc
tgttcgggctcttcgctgggcagggagaaaatcatggccatggagccgctggataacctg
caggccattttaaggaagcaggaggagaccagcgaggggagaaagcttttacggctcgag
ccctttgccgaggccggcggctggaaagatatcagagcccagctaaggaaggcgggccag
ggggcaatccttgatcccgaagagcttttggccgtggcggacacccttactgccggcagg
acaatcaggaagttttttcaggacaggcaggagcagtatcccttgctttatgaagtgtcc
tctgcgcttgtttctcttcccgaactggaaagaaagataaaaaacgctatcctgccgggc
ggcgaggtagccgacggcgcttcgccggaactggcgcagatacgccgcaggctggctgct
gcccaggcccaggtgaaggagcacctggagcacatcatccgctctcccagttaccagaaa
tacctgcaagagcccatagtgacgatcagggaaggaaggtatgtggttccggttaaaata
gagcaccgctcccaggtgccgggcatagttcatgaccagtcggcgagcggcgcaaccctc
tttatcgagccgatggcggtggtggaaaagaataatgaattaagacgcctgatggcggcg
gaaaaacgggagattcagcgcattttagccgaactttcggccggggtggcccagcatgcc
ggacctattggggcctctttagaagccctgggagaactggactttatcatggccagggcc
aggtacagccagaagctggacgcctgggcccccttactggagggcgaggcctgtatggac
atcaggcggggcaggcacccgcttttgcagggtgaagtggtgccgatcgatatccgcctg
ggtgccgacttcgataccctggtcattaccggccccaataccggcgggaaaacggtagcc
ttaaaaaccgccgggttgctggtattgatggcccagtccggtctgcacataccggccggg
gaaggttcccggctgggcatattcaggcaggtttttgccgatatcggcgacgaacagagc
atcgaacagtcgctgagcactttttcatcgcacatgaataatatagtggaaattatcggc
aaggccggcccggacagcctggtactgctcgacgaactgggggccggtaccgatcctgcc
gaaggggccgccctggcccagtcaattttagagaagctgcactcggccggtgcaaaaacc
gtagctaccacccattacggcgaattaaaggactttgccctgacccgggagcgggtggaa
aatgccagcgtggagtttgacgccattactttaaggccgacctaccgtcttttaatcggc
aagcctggccgcagcaatgcctttgaaattgccgccaggctggggttgcctgaagaagtg
gtgaaaagggccaggagctttttaaccgcagagcatattcaggcagaggaactgatgcgc
agcctggaaaaaacgcagcaggaagccgaggccgagcggaggagggcggccgaactggcc
agcgaggccagggcccttaaggaaaggtacgaaaaaattgaggcagacctggcgtcgaag
agggaatcgattctgtccaaggctgccgaggaggcccaggccctggtgagggcggccagg
ctggaggcggaggcggcggtaagagagctcagggagaaaatggcagaggaggccgcccgc
gaaagggagaatgccatccgggaggccagggaaaagctcagaaagttacaacagcgggta
ggccgcgccgtgccggaaaaaaccgtgccgggagaagctcctgccggtttaaggcccgga
gaggaggtcttcctgaccaggtacaaccagaaagggtatgttctcgaaccgcctggagcg
ggcggcgaggtgctggtccaggtgggcgtaatcaaaatgaacgtgcccttaagggaactg
cgcagggtaaaggaagccaggcccgccggggggcagagcgaagtggcgggagtgctgctg
aacaaggcccgggaaatttcgccggagcttgacttgagaggattgtatgcggacgaggcc
ttgcttgaggtggaaaagtacctggatgatgcgtacctggcaggcctgtccagggtttac
ctgatccacggcaaggggaccggctcgctgagggcggcaattcacaggcaattgagcggc
caccgccgggtaaaatcgttccggctgggcgagcacggcgagggcgggctgggggtaacg
gtggttgaactggcctga
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