Pelotomaculum thermopropionicum: PTH_1976
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Entry
PTH_1976 CDS
T00519
Symbol
PolA
Name
(GenBank) DNA polymerase I - 3'-5' exonuclease and polymerase domains
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pth
Pelotomaculum thermopropionicum
Pathway
pth03030
DNA replication
pth03410
Base excision repair
pth03420
Nucleotide excision repair
pth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTH_1976 (PolA)
03410 Base excision repair
PTH_1976 (PolA)
03420 Nucleotide excision repair
PTH_1976 (PolA)
03440 Homologous recombination
PTH_1976 (PolA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pth03032
]
PTH_1976 (PolA)
03400 DNA repair and recombination proteins [BR:
pth03400
]
PTH_1976 (PolA)
Enzymes [BR:
pth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTH_1976 (PolA)
DNA replication proteins [BR:
pth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PTH_1976 (PolA)
DNA repair and recombination proteins [BR:
pth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PTH_1976 (PolA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PTH_1976 (PolA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
BAF60157
UniProt:
A5D0T5
LinkDB
All DBs
Position
2090531..2093179
Genome browser
AA seq
882 aa
AA seq
DB search
MTSETMVIIDGNSLAHRAYHAIPPLSTSQGILTNAVYGFTNMLLKILAEEHPDRIAVAFD
KGKITFRHDDFEKYKAHRPATPDDLRPQFPVLKEVLKAMRIQVFEAEGYEADDLIGTLSA
RAEQAGLRTIIVTGDRDALQLVSPLTSVRLVKKGISELDEYDEGMVWQRYGITPRQYADF
KGLTGDASDNIPGIPGIGEKTASRLLKEYGSLEEIIAHADELAGRTGELVKTYKHQAELS
KKLATIHRDVPVEIDLALCRWQGPDHKELLEIFKKLEFKSLIKSIYFDRDEKTGVKKKEE
SARQALTRPNLEVYQAACQPIDSPARIKSFIKAARKAGKVSLVLAGDGRGGIAAASFALE
GESTAYSLDGPPDKILEILKTICEDGNIKKYCHNGKETIRLLHRNGITLRQLAFDTMIAA
YLLNPASSNQDLEDISLEHLNAVLPGEDRKLPAQAHCIMELAQLLDNKLKLYGQDRLFYE
IEIPLAGILAEMEIEGVAVDKKQLEAMSEELGRQIEKLADEIYRLTGREFNINSPKQLGK
VLFEDLKLPVIKKTKTGYSTDADVLEELAAAHEAVAKILEYRQMAKLKSTYADGLAALIN
PETGKLHTTFHQTVTNTGRLSSSDPNLQNIPIRLEAGRLIRKVFIPGRPENLLLTADYSQ
IELRVLAHISGDPALIKAFKNGEDIHTRTAAEIFAVRPEEVTREMRTRAKAVNFGIVYGL
SDFGLARDIKVSRQEARRYIENYFARYAGVKDYIERIIREARQKGYVTTLLNRRRYLPDL
FSPNRTIRSFGERTAMNTPIQGSAADIIKLAMVNIHRELAEHGLKAKMILQVHDELIFDA
PAVEIDQLKDLVKRCMENALVLEVPLLVEIKAGRNWYDVKKI
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcagaaaccatggttattattgacggcaacagcctggcccacagggcctaccac
gccatcccgccgctgtcaaccagccagggaatacttaccaacgcggtatacggctttacc
aacatgctgctgaaaattttggccgaagaacacccggacaggattgcggtggcattcgac
aagggcaaaattactttccgccatgacgactttgagaaatacaaggcccaccggccggcc
accccggacgacctgcggccacagtttccggttctgaaagaagttttaaaagctatgcgc
attcaggtttttgaagccgaaggatatgaagccgacgacctgatcggcaccctctcggcc
agggcggagcaggccggcctgagaacaatcatagttaccggcgaccgcgacgccctgcag
cttgtatcccctttaaccagcgtgaggctggttaaaaaggggatcagcgagctggacgag
tacgacgagggcatggtctggcagaggtatgggattacgccgcggcagtatgcagacttt
aagggcctgaccggggacgcctcggacaacattccgggcatccccggaataggggaaaaa
acggcctcccgcctgctaaaggaatacggcagtcttgaagaaattatagcccacgccgat
gaactggccggccggacgggtgagctggtaaaaacctacaaacaccaggcagaactgtca
aaaaagcttgctaccatacatcgcgacgtgcctgtggaaatcgacctcgctctgtgccgc
tggcagggcccggatcataaagagctcctggaaatttttaaaaagctggaatttaagtcg
ctgataaaatccatttattttgacagggacgaaaaaaccggcgtcaaaaaaaaggaggaa
agcgccaggcaggccctgaccaggcccaacctggaagtttaccaggcagcctgccagccc
attgactcgccggccaggataaagtctttcattaaggccgcccggaaggcggggaaggtg
tcccttgtactggccggggacggccggggcgggattgccgcggcgagcttcgccctggag
ggggaaagcacggcctacagcttggacggccctccggataaaatcctggaaattttgaaa
accatatgcgaagacggcaacatcaagaaatactgccacaacggcaaagaaacaattcgc
ctgcttcaccggaacggcataaccttgaggcaactggccttcgacaccatgattgccgcc
tatctgctcaatcccgcgtcctccaaccaggatctggaggacatttccctggagcattta
aatgccgttctgcccggcgaggacagaaaactcccggcccaagcccactgcatcatggag
ctggcccagcttctggacaacaaactaaagctttacgggcaggaccggcttttttacgag
atagagatccctctggccggaattctggccgaaatggaaattgaaggcgtggcggtggac
aaaaagcagcttgaggccatgtcggaagaactgggccgccagatcgaaaaactggcggac
gaaatttaccgcctgaccggcagggaattcaacatcaattcccccaaacagctgggcaaa
gtgcttttcgaggatttaaagcttcctgtaataaagaaaaccaaaaccggttattcaacg
gacgccgacgtgctggaggaactggcggcggcacacgaagcggtggctaaaatcctggag
taccgccagatggcaaagctgaagtccacttacgccgacggcctggcggccttgatcaac
cccgagacgggcaagctgcacaccaccttccaccagaccgtcaccaacacgggcaggctg
tccagctctgatccgaacctgcaaaacatcccgatccgcctcgaggcagggaggctgatc
aggaaggtttttatcccaggccggccggagaacctgctcctgacggccgattactcccag
atcgagctgcgcgtactcgcccacataagcggcgacccggccctgattaaagcttttaaa
aacggggaagatatccataccagaacggctgcggagatttttgcggtgcggcctgaagag
gtaaccagggaaatgcgcaccagggccaaagctgtgaattttggcattgtctacggactg
agcgacttcggcctggccagggacatcaaagtaagccggcaggaggccaggcgctatatc
gaaaactactttgcccgctacgccggggtaaaagattacattgaacggatcatccgcgaa
gcgcgccaaaaaggctacgtcaccacccttttaaacaggcgccgctacctgccggacctg
ttcagcccgaacaggacaattcgcagcttcggcgagcgcacggcaatgaacacgcccatt
cagggcagcgcggcggatatcatcaagctggccatggtcaacatccaccgggagctggcc
gaacacggcctgaaggcaaaaatgatcctgcaggtgcacgatgaactgattttcgacgcc
ccggccgtcgagatcgaccagcttaaagatctggtcaagcgctgcatggaaaatgccctt
gtcctggaagtacccctattggtagagataaaagccggccggaactggtatgacgtaaaa
aaaatctaa
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