Pelotomaculum thermopropionicum: PTH_1996
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Entry
PTH_1996 CDS
T00519
Name
(GenBank) predicted HD-superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pth
Pelotomaculum thermopropionicum
Brite
KEGG Orthology (KO) [BR:
pth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pth03019
]
PTH_1996
Messenger RNA biogenesis [BR:
pth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PTH_1996
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
BAF60177
UniProt:
A5D0S1
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All DBs
Position
complement(2111047..2111988)
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AA seq
313 aa
AA seq
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MAELLVNQICPGATVQGTFALKAKKLLPYREAPGHFLAVTLADRTGSVEGRLWEGAEEAD
SRLKAGDIVTVEALAVAYNGSVQLRIDSIVKENGRIDPAKFIPSAGRLEEAEMKLMQLID
SLTQPYLKALLTHIFSKQDFYEAFSRAPAAAQYHHALLGGLLVHSVTVASAADGVVKDYP
GADRDLLVAGAILHDIGKVQEYRCRGTVEQTDEGRLLGHIVSGVLFLDRAIAGVPGFPAD
LRLKLLHMITSHHGRYEWQSPKRPKFLEAALLHQLDLLDAQADMFSRAAAGREDGDSSWT
GWVKGLDRCVYCR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactgcttgttaaccagatttgtcccggggcaaccgtacaaggaactttcgcg
cttaaagcaaaaaaacttcttccctaccgggaggcgccgggacatttcctggccgttact
ctggccgatcgcaccggcagcgttgaggggcggctctgggaaggggccgaggaagcagac
tcccgcctgaaggcgggggatattgttaccgttgaggcgctggccgtggcatacaacggt
tccgtgcagttgcggatcgattcaattgtcaaagaaaatggccggattgacccggcaaag
ttcatcccttccgcaggaaggctggaggaggccgaaatgaagcttatgcagctaattgat
tctttaacccagccctacttaaaggcgctcttaacgcatattttttcaaaacaggacttt
tacgaagccttcagccgggctcctgccgctgcccagtaccatcatgccctattgggcggg
cttttggtccacagcgtcacggtagcttcggcggccgacggcgtggttaaagactatccg
ggcgcagaccgggaccttctggtggccggggccatcctgcacgacatcggcaaggtgcag
gaataccgctgccgcggcaccgtggagcagaccgacgaggggcgtcttttagggcatatt
gtttccggcgtgctgtttttagaccgcgccattgccggtgtgccgggcttcccggcggac
ctgcgcttaaagcttctgcacatgattaccagccaccacgggcgctacgagtggcagtcc
cccaagcggcccaagtttttggaggcggccctgctgcaccagctcgacctgctggacgcc
caggcggacatgttctcccgcgctgcagcggggcgggaagatggcgactcctcctggacc
ggctgggtgaaagggctggaccggtgcgtttactgcaggtaa
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