Providencia stuartii 2017-45-35: OI982_06060
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Entry
OI982_06060 CDS
T09168
Symbol
ldtD
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
ptha
Providencia stuartii 2017-45-35
Brite
KEGG Orthology (KO) [BR:
ptha00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptha01002
]
OI982_06060 (ldtD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptha01011
]
OI982_06060 (ldtD)
Peptidases and inhibitors [BR:
ptha01002
]
Cysteine peptidases
Family C82
OI982_06060 (ldtD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ptha01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
OI982_06060 (ldtD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WIJ75042
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All DBs
Position
complement(1229646..1231373)
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AA seq
575 aa
AA seq
DB search
MAKKRVKALQLSVICGLLSIQLPVFSAQDNGLILTEEAPLQQEVVATPVATITPTESLAQ
ITGALPADIKPVFSSQLAKIYADRQMKLLWQDETAIEQFQQQLAELALSGVQPQFNEWLA
ALEHVQLSELGRDVILSDAMLGYLQYLSGVSANGQFWLYRKQPYKIAAPTAEQMKPWLDA
AAENRLNEWVKLQAPQHSLYQPMREEMLRQLKMDDDGLALVDTKTLKPGQSSDDVIALRE
ILYRQGLLDETAINTELDAAAPDAEIAKATAQARLYSDELVEAVKKFQQRYGLEADGMVG
KGTKVWLNMKPQQKAGLMALNIQRLRIIPENNGTGILVNIPAFSLNFFLNDEVILDSKVI
VGRPDRKTPIMSSALNNVVINPPWSVPTSMARKDIAPRGKQDPSYFSRKGYTVYSGWGED
SFEIDPYSINWDVITPANFPYRIRQAPGPTNSLGRYKFNMPSSDAIYLHDTPNHSLFNRS
ARAISSGCVRVNKASELASILLGDAGWEQKRIDGAVKAGSTRYVNIPDRIPVYLYYQTAW
VDKEQQPQYRADIYQYDNSINNAEKYLPAIKNILH
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaagagtgaaagctctgcaactttcggtaatttgtgggctgttgtcgata
caacttcctgtattttcagcgcaagacaatgggctaattttgacagaagaagcgccattg
cagcaagaggtggtggcaacccctgtggcgactatcacaccaactgaaagtttagcgcaa
attacgggagcattacctgccgatataaaacctgttttttcttcacaactcgcgaagatt
tatgcagatcggcagatgaaactgttatggcaagatgaaacggctatcgaacagtttcag
caacaactggcggagctggcactttcaggggtacaacctcaatttaatgagtggttagcc
gcccttgaacatgttcagttgagcgaattaggccgtgatgtgattttgtctgatgccatg
ttgggttatctacaatatctttctggtgtttcagctaatgggcaattttggctataccgg
aaacagccttacaaaatagcggcacctacggcagagcaaatgaagccatggttggatgcc
gccgccgaaaaccgccttaatgaatgggtcaaattacaagcgcctcaacattccctgtat
cagcctatgcgcgaagaaatgttgaggcaactaaaaatggatgacgatgggttggcttta
gtggataccaaaaccctaaaaccgggtcaatcgagtgatgatgttattgctttacgtgag
atcttgtatcgccaagggctacttgatgaaacggcgattaatacagagttagatgccgca
gcgccagatgcagaaatcgccaaagcgaccgcacaagcgcgtttgtacagtgatgagcta
gttgaagctgtcaaaaaatttcaacagcgctacggcttggaagctgacggtatggtgggg
aaaggcaccaaagtttggctgaatatgaaacctcagcaaaaagcagggctaatggcgttg
aatattcaacgcttacgtattattcctgaaaataatggcactgggatcttggtgaatatc
cctgcattttcattaaatttcttcctaaatgatgaagtgattttagattcgaaagtgatt
gttggccggcctgatcgtaaaacgccaataatgagcagtgcattaaataatgtggtgatc
aatccaccttggagcgtgcctaccagcatggctcgtaaagacattgcaccaagagggaag
caggatcctagctattttagccgcaaaggttacacggtctattccggatggggggaagac
tcctttgagattgatccctactccatcaattgggatgttatcactccagcgaattttcct
tatcggatccgccaagcaccggggccgaccaactcattaggccgctataaatttaatatg
ccaagttcggatgcaatctacctgcatgatacaccgaaccacagcttatttaatcggagt
gcacgtgctatcagttcagggtgcgtacgggtaaataaagctagcgaattagccagtatc
ttgttaggtgatgcagggtgggagcaaaagcgtattgatggtgcagtaaaagcaggaagt
acgcgttatgtgaatattccggataggatccccgtttatctttattatcaaacggcgtgg
gtagacaaagagcaacagcctcagtaccgcgctgatatttaccaatatgataatagtatc
aataatgctgaaaaatatttacccgcaataaaaaacatcttacattaa
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