Providencia stuartii 2017-45-35: OI982_07685
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Entry
OI982_07685 CDS
T09168
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ptha
Providencia stuartii 2017-45-35
Pathway
ptha03030
DNA replication
ptha03430
Mismatch repair
ptha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OI982_07685 (dnaE)
03430 Mismatch repair
OI982_07685 (dnaE)
03440 Homologous recombination
OI982_07685 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptha03032
]
OI982_07685 (dnaE)
03400 DNA repair and recombination proteins [BR:
ptha03400
]
OI982_07685 (dnaE)
Enzymes [BR:
ptha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OI982_07685 (dnaE)
DNA replication proteins [BR:
ptha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OI982_07685 (dnaE)
DNA repair and recombination proteins [BR:
ptha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OI982_07685 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Arena_ncap_C
Motif
Other DBs
NCBI-ProteinID:
WIJ75333
LinkDB
All DBs
Position
complement(1585544..1589026)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKTGPLVKKVAAMGMPAFAITDFTNLCGLVKFYGAAHGA
GIKPIIGADFFVESEQLGDEIAHLTVLARNNEGYQNLTLLISEAYQKGYGAIGPTIHRDW
LVKHKEGLILLSGGRQGDVGQFLLRGNQALVDECLAFYETHFPGCYYLELIRTGRPDEES
YLHAAVELATQRGLPVVATNDVRFIESSDFDAHEIRVAIHDGFTLSDPKRPKKYSPQQYL
RSEEEMCELFADIPEALENSVEIAKRCNVTIRLGEYFLPQFPTGDMKTEDFLVMRSKEGL
EERLKFLFPDEKVRAERRPEYDERLEVELNVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAQ
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKKNLEPVDIAAIPLDDQKSFDML
QRSETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAIKNGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARQKGGIFKEIFDLCARVDLKKINRRVMEKLIMAGAFDHLGPHRAALMS
SLEDALKAADQHAKAEAIGQTDMFGVLAEAPEQVESSYASVPKWPDQVVLDGERETLGLY
LTGHPITRYLNEIERYTNGLRLKDVNPTPRGQVTTVVGLVLSAKVITTKRGNRIGICTLD
DRSGRLDIMLFSDALDKYQHLLEKDSILIATGQVSFDDFNGGNKMTVRELMDISEAREKY
ARGLAISLSDKQINDQLLNRLRSTLEPHRSGTIPVHLYYQKDDARAKLKFGVVWRVTPVD
DLLNSLRTLLGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacctcgttttattcacttacgcgttcacagcgactattcaatgattgatggt
ctggcaaaaaccggcccattagttaaaaaagtggcagcaatgggcatgccagcatttgcg
atcactgatttcactaacttatgtggtttggtgaagttctatggggcagcgcatggtgct
ggtattaaacctattattggcgctgacttttttgttgaaagcgagcaattgggtgatgag
attgctcacttaaccgtactagctcgtaataacgaaggctaccaaaacctgacactgttg
atctcagaagcctatcaaaaaggctatggggcgatagggccaacgatccatcgcgattgg
cttgttaagcataaagaaggtttgatactgctttcaggtggccgccaaggggatgtaggg
caatttttattgcgcggtaatcaagctctcgttgatgaatgcttggcattttacgaaacc
cactttcccggttgctactatttagaactcattcgtacaggaaggcctgacgaagagagt
tatttacatgcggcggtagagcttgcaacgcagcgtggtttacctgttgttgcgactaat
gatgtacgttttattgaaagtagcgactttgatgcgcatgaaatacgtgtcgctatccat
gatggttttaccttatctgatcctaaaaggcctaaaaaatatagccctcagcaatattta
cgatctgaagaagagatgtgtgagctgtttgccgacatccctgaagcacttgaaaatagt
gtagagattgctaagcgttgtaacgtaaccattcgtcttggtgagtacttccttccccaa
ttcccaacaggggatatgaaaacggaagactttttggttatgcggtcaaaagagggatta
gaggagcgcctgaagttcctttttcctgatgagaaagtgagagccgaaagacgtcctgaa
tatgatgaacggctagaagtcgagctaaacgttattaaccaaatggggttccctggttat
ttcttgatcgtgatggagtttattcaatggtcaaaagataacggtgtaccagtagggcct
ggtcgtggctccggtgcaggctctttggttgcctacgctctaaaaattacggacttagat
ccgttagagttcgatctcctttttgaacgtttcttaaaccctgaacgggtttctatgcct
gactttgacgttgacttctgtatggaaaaacgcgatcaagtgattgatcacgttgctcaa
atgtatggacgagatgcggtttcacagatcatcacgttcggtacgatggcggcgaaggcg
gttatccgcgacgtaggccgtgtattaggccacccatacggttttgtcgatcggatctcg
aaactggttccccctgatccgggaatgacattagagaaagcatttgaggccgagccgcaa
ctgcctgaaatttacgaagccgatgaagaggtgaaagcactcatcgatatggcgcgtaaa
cttgaaggggtcacacgtaacgccgggaaacatgcagggggcgtggttattgcgcctacc
aaaattaccgattttgcccctctgtattgcgatgcggaagggaataacccagtcacccaa
tttgataaaaacgacgttgaatatgcgggattggtgaagttcgactttttgggattacgt
acgctcacgatcattaactgggcgttagagatgatcaacgcaaggcgggctaagaaaaac
cttgagccagtggatattgcggcaataccattggatgatcaaaaaagtttcgacatgttg
cagcgttcagaaacaacggcggtattccagcttgaatcccgagggatgaaggatttgatc
aagcgcctgcgtcctgactgctttgaagatatgattgcattggtggcactgtttcgccct
ggtccattgcaatcagggatggtggataactttatcgaccgtaagcatgggcgtgaagag
atttcataccctgatgtgcagtggcaacatgaatcattaaaacctgttctagagccgacg
tatggcattatcttataccaagaacaggtgatgcagattgcacaggtactcgctggttat
actctcggcggcgcggatatgttacgtcgtgcgatggggaaaaagaaaccggaggagatg
gcaaaacagcgttccgtctttgaggaaggagccatcaaaaacggtatcgatggtgagcta
tcgatgaaaatctttgacttggtagaaaaatttgccggttacggatttaacaaatctcac
tccgccgcttatgcgctcgtttcataccagacattatggcttaaagcgcattatccggct
gaatttatggcggctgttatgaccgcggatatggataacaccgagaaagtcgtcggcctc
gtcgatgaatgttggcgaatggggttaaaagtattacctcctgatattaatagtgggcta
tatcattttcacgttaacgatgaaggtgaaattgtttacggtatcggtgcgattaaaggt
gtcggtgaaggcccaattgaggcgattatagaagctcgccaaaaaggtggcatctttaag
gaaatttttgatctttgtgcgcgtgttgatcttaaaaaaattaatcgtcgcgtcatggaa
aaactgatcatggcgggggcgttcgatcatttagggcctcaccgcgcagccttaatgtct
tcactggaagatgcgctgaaagcggcggatcagcacgccaaagcagaggctatagggcaa
actgatatgtttggtgtgcttgcagaagcccctgaacaagtggaaagctcatacgcgagc
gtaccaaaatggccagatcaagttgttttggacggtgaaagggaaacgctgggtctttat
ttgacagggcacccgataacgcgttatttaaatgaaatagaacgttatactaatggtctg
agattgaaagatgtgaaccctacccctcgtggtcaagtgacaactgtggtaggtttagta
ctttcagccaaagttattactaccaagcgtggcaatcgaattggtatttgtacgcttgat
gatcgttccggtcgtctggatattatgttattttcagatgcactagataaataccagcac
ttgctggaaaaagacagtatcctgattgccaccggtcaggtcagctttgatgatttcaac
ggtggtaataaaatgacagtgcgggagttaatggatattagtgaagcaagggaaaaatat
gcgcgaggacttgcaatttcactgtcagacaaacaaattaatgatcagttactgaaccga
cttcgcagcactcttgaaccccatcgttcaggaacgattccggttcatttgtattatcag
aaggatgatgccagagcaaagcttaaatttggtgttgtttggcgcgtaacacccgttgat
gaccttctgaattctctgcgaactctgctgggtaatgagcaggtagaattagaatttgac
taa
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