KEGG   Providencia stuartii 2017-45-35: OI982_09635
Entry
OI982_09635       CDS       T09168                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ptha  Providencia stuartii 2017-45-35
Pathway
ptha02020  Two-component system
ptha02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ptha00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    OI982_09635 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    OI982_09635 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptha03021]
    OI982_09635 (rpoN)
Transcription machinery [BR:ptha03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     OI982_09635 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID SHNi-TPR
Other DBs
NCBI-ProteinID: WIJ75685
LinkDB
Position
1933707..1935152
AA seq 481 aa
MKQSLQLRISQQLAMTPQLQQAIRLLQLSTLELQQEIQLALETNPLLEQEENASDLDSLD
SLDIHTDSSEIDTKDALEKSDMPDELPLDANWDEIYTAGTPSGTNNDYSFDELPVYQGET
TQTLQDYLLWQSELTPFTDTDRAIATAIIDSIDDSGYLTTPIKEIHEGINNPDITLEEVV
AVLKRIQHFDPLGVAAQDLKECLLIQLSLYPKGTDGLDEARLIISQHIDLLANRDFRQLS
KLTRLKEDALKTAIDLILTLNPKPGQSINTGESEYVIPDVLVKKINGHWQVELNTDSIPK
LGINNHYASLIKDSVNESDSQYIRSHLQDAKWLIKSLESRNETLLKVATCIVEQQQEFFE
FGEEYMKPMILADIAYQVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVSTDTGGEAS
STAIRALVKKLVAAENPAKPLSDSKLTSMLAEQGIQVARRTVAKYRESLSIPPSNQRKQL
V
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgaagcaaagtttgcagctcagaatcagtcaacaacttgcaatgactcctcaattgcaa
caggctatccgtctgttgcaactttctacgcttgagctacaacaagagatccaactcgcc
ctagaaactaacccgcttctggaacaagaagaaaacgcctctgacttagactcccttgat
agtctcgatattcatactgacagcagtgaaatcgatactaaagatgcccttgaaaaaagt
gatatgccagatgagcttcctttggatgcgaattgggatgaaatttatactgcgggtacg
ccatcgggtacaaataatgactatagctttgatgagttacccgtctatcaaggggaaacc
acacagacgctgcaagactatttgttatggcaatctgaattaacgccttttacagacaca
gacagagcgattgctaccgcgattattgactcaattgatgattctggctatctgacaacg
ccaataaaagagatccacgaaggtatcaataacccagatatcacacttgaagaagtggtc
gctgttttaaaacgcattcagcattttgatccgcttggtgtggcagcacaagatctgaaa
gagtgcttattgatccagctatccctttacccaaaaggtactgacgggctagatgaggct
cggttgattattagtcaacatattgatttactggctaatcgtgattttcgccagctcagt
aaactcacccgtctaaaagaggatgctttaaaaaccgctattgacctgatattgacgttg
aaccctaaaccgggccaatctatcaataccggagagtcggaatatgttattcccgatgtt
ttggtgaaaaaaatcaacgggcactggcaagttgaattaaatacagatagcatccctaaa
ttaggtatcaataatcactatgcttctttgataaaagattcagtgaacgaaagtgattca
caatatattcgtagtcacttacaagatgccaaatggctgataaaaagcttagaaagccgt
aatgaaactttgttaaaagtggcgacttgtattgtagaacaacaacaagaattctttgag
ttcggtgaagagtacatgaaacccatgatattggcagatattgcttatcaggtggatatg
cacgaatcaacgatttcgagagtgacaactcaaaagtttctccatagcccgcgaggaatt
ttcgagttgaagtattttttctctagccacgtcagtaccgatacaggaggtgaagcctct
tcaacggcaatacgtgcgttagtgaaaaaactggttgctgctgaaaacccagcaaaacca
ttaagtgacagtaaattgacaagcatgctagccgaacagggcattcaggttgcacgtcga
actgtcgctaagtaccgtgaatcgttatctattccgccctcaaaccaacgcaaacagttg
gtttaa

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