Providencia stuartii 2017-45-35: OI982_09635
Help
Entry
OI982_09635 CDS
T09168
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
ptha
Providencia stuartii 2017-45-35
Pathway
ptha02020
Two-component system
ptha02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ptha00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OI982_09635 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OI982_09635 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptha03021
]
OI982_09635 (rpoN)
Transcription machinery [BR:
ptha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OI982_09635 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
SHNi-TPR
Motif
Other DBs
NCBI-ProteinID:
WIJ75685
LinkDB
All DBs
Position
1933707..1935152
Genome browser
AA seq
481 aa
AA seq
DB search
MKQSLQLRISQQLAMTPQLQQAIRLLQLSTLELQQEIQLALETNPLLEQEENASDLDSLD
SLDIHTDSSEIDTKDALEKSDMPDELPLDANWDEIYTAGTPSGTNNDYSFDELPVYQGET
TQTLQDYLLWQSELTPFTDTDRAIATAIIDSIDDSGYLTTPIKEIHEGINNPDITLEEVV
AVLKRIQHFDPLGVAAQDLKECLLIQLSLYPKGTDGLDEARLIISQHIDLLANRDFRQLS
KLTRLKEDALKTAIDLILTLNPKPGQSINTGESEYVIPDVLVKKINGHWQVELNTDSIPK
LGINNHYASLIKDSVNESDSQYIRSHLQDAKWLIKSLESRNETLLKVATCIVEQQQEFFE
FGEEYMKPMILADIAYQVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVSTDTGGEAS
STAIRALVKKLVAAENPAKPLSDSKLTSMLAEQGIQVARRTVAKYRESLSIPPSNQRKQL
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaagtttgcagctcagaatcagtcaacaacttgcaatgactcctcaattgcaa
caggctatccgtctgttgcaactttctacgcttgagctacaacaagagatccaactcgcc
ctagaaactaacccgcttctggaacaagaagaaaacgcctctgacttagactcccttgat
agtctcgatattcatactgacagcagtgaaatcgatactaaagatgcccttgaaaaaagt
gatatgccagatgagcttcctttggatgcgaattgggatgaaatttatactgcgggtacg
ccatcgggtacaaataatgactatagctttgatgagttacccgtctatcaaggggaaacc
acacagacgctgcaagactatttgttatggcaatctgaattaacgccttttacagacaca
gacagagcgattgctaccgcgattattgactcaattgatgattctggctatctgacaacg
ccaataaaagagatccacgaaggtatcaataacccagatatcacacttgaagaagtggtc
gctgttttaaaacgcattcagcattttgatccgcttggtgtggcagcacaagatctgaaa
gagtgcttattgatccagctatccctttacccaaaaggtactgacgggctagatgaggct
cggttgattattagtcaacatattgatttactggctaatcgtgattttcgccagctcagt
aaactcacccgtctaaaagaggatgctttaaaaaccgctattgacctgatattgacgttg
aaccctaaaccgggccaatctatcaataccggagagtcggaatatgttattcccgatgtt
ttggtgaaaaaaatcaacgggcactggcaagttgaattaaatacagatagcatccctaaa
ttaggtatcaataatcactatgcttctttgataaaagattcagtgaacgaaagtgattca
caatatattcgtagtcacttacaagatgccaaatggctgataaaaagcttagaaagccgt
aatgaaactttgttaaaagtggcgacttgtattgtagaacaacaacaagaattctttgag
ttcggtgaagagtacatgaaacccatgatattggcagatattgcttatcaggtggatatg
cacgaatcaacgatttcgagagtgacaactcaaaagtttctccatagcccgcgaggaatt
ttcgagttgaagtattttttctctagccacgtcagtaccgatacaggaggtgaagcctct
tcaacggcaatacgtgcgttagtgaaaaaactggttgctgctgaaaacccagcaaaacca
ttaagtgacagtaaattgacaagcatgctagccgaacagggcattcaggttgcacgtcga
actgtcgctaagtaccgtgaatcgttatctattccgccctcaaaccaacgcaaacagttg
gtttaa
DBGET
integrated database retrieval system