Providencia stuartii 2017-45-35: OI982_10945
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Entry
OI982_10945 CDS
T09168
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ptha
Providencia stuartii 2017-45-35
Pathway
ptha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OI982_10945 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptha03019
]
OI982_10945 (pnp)
03016 Transfer RNA biogenesis [BR:
ptha03016
]
OI982_10945 (pnp)
Enzymes [BR:
ptha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OI982_10945 (pnp)
Messenger RNA biogenesis [BR:
ptha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OI982_10945 (pnp)
Transfer RNA biogenesis [BR:
ptha03016
]
Prokaryotic type
tRNA degradation factors
OI982_10945 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
S1_2
S1_RRP5
KH_2
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
WIJ76058
LinkDB
All DBs
Position
complement(2209801..2211924)
Genome browser
AA seq
707 aa
AA seq
DB search
MLNPIVRKFQYGQHTVSIETGMIARQATAAVMVNMDDTAVFVTAVAQKKVKEGQDFFPLT
VNYQERSYAAGRIPGSFFRREGRPGEGETLIARLIDRPLRPLFPEGFLNEIQIIATVVSV
NPQVNPDIVAMIGASAALALSGVPFNGPIGAARVGFINDQYVLNPTADELKLSRLDLVVA
GTESAVLMVESEADLLSEEQMLGAVVFGHDQQQIVIQEINELVKEAGKEKWDWQPEPVNQ
ALRDKVAALAESRMGDAYRITEKQERYEQVDLIKEEVTAAIVAEDENVDVAEVADILANL
EKQVVRSRVIRGEPRIDGREKDMVRALDVRTSVLPRTHGSALFTRGETQALVTATLGTER
DAQVIDQLMGEYTDRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVMAVMPDHAD
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDDFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITREIMQVALNQAKGARLHILGTMEQA
INSPRDDISEFAPRIHTIRINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGLKAKEAIRRIEEITAEVEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEIDRQGRIRLSMKEAVATEETPAQQQDSAE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatcctatcgtacgcaaatttcaatacggtcaacataccgtatccattgaaacc
ggcatgatagcgcgtcaagcgactgccgctgttatggtaaacatggatgatacagccgtt
ttcgtgaccgcggttgctcagaaaaaagttaaagaaggccaagacttcttccctctgacc
gttaactaccaagagcgctcttatgctgctggtcgtattccaggcagtttcttccgtcgt
gaaggccgccctggtgaaggtgaaacgctgatcgcgcgtcttattgaccgcccattacgc
cctctgttcccagaaggtttcctgaacgaaatccaaatcatcgcaaccgttgtttctgtt
aacccacaagttaacccggatattgttgctatgatcggtgcatcggctgcattggcgttg
tctggtgttccttttaatggcccaattggtgcggcacgtgttggttttatcaatgaccaa
tatgttctgaacccaacagcagatgagctaaaattaagccgccttgatttagtggtagca
ggaacagaaagcgcagttctgatggttgagtcagaagcggatctgttaagcgaagagcaa
atgctgggtgccgttgtttttggtcatgatcaacaacaaatcgtgattcaagaaatcaat
gagttagttaaagaagcaggtaaagaaaaatgggattggcaaccagagccagttaaccaa
gctttacgtgataaagttgcagcgctggctgaaagccgtatgggtgatgcttatcgtatc
actgaaaaacaagagcgttatgagcaagttgacctgatcaaagaagaagtcacagcagca
atcgtggctgaagatgaaaatgtcgacgtagctgaagttgctgacattctagcgaaccta
gaaaaacaagttgttcgtagccgtgtcattcgtggtgagccacgtattgatggtcgtgaa
aaagacatggttcgtgcgctggatgtacgcactagcgttctgccacgtactcacggttct
gcgctatttacccgtggtgaaactcaggcattagtcactgcaacactgggtactgaacgt
gatgcacaggttattgaccagttaatgggcgaatatactgatcgcttcttgttccactat
aacttccctccatactctgttggtgaaacaggtatggttggttcgcctaagcgtcgtgaa
attggtcatggtcgtttagcgaaacgcggtgtgatggcggtcatgcctgatcatgctgat
ttcccatacactgttcgtgttgtatctgaaatcactgaatcaaacggttcatcatcaatg
gcgtcggtttgtggtgcttctttagcactgatggatgcaggtgtaccaattaaagcagcg
gttgctggtattgctatgggtctggttaaagaaggcgatgatttcgtcgtactttctgac
atccttggtgatgaagaccatttaggcgatatggactttaaagtcgcaggtagccgtgat
ggtatcagcgcactgcaaatggatattaaaatcgaaggtattactcgcgaaatcatgcaa
gttgcattgaaccaagcaaaaggtgctcgtctgcacatcctaggtacaatggaacaagcg
attaacagccctcgtgatgatatttctgaatttgcaccacgtattcacactatccgcatt
aatccagataagattaaagatgttatcggtaaaggtggttcggttatccgtgcgctgaca
gaagaaactggcactacaatcgaaattgaagatgatggtacagtgaaaattgctgcaact
gatggcttgaaagcaaaagaagctatccgtcgtatcgaagaaattactgctgaagtcgaa
gtcggccgtgtttaccaaggtaaagttactcgtatcgttgactttggtgcgttcgttgct
atcggtggtggtaaagaaggcttagtgcatatttctcaaatcgccgataagcgtgttgag
aaagtgactgactatctgcaaatgggtcaagaagttcctgttaaggtgttggaaatcgac
cgtcaaggccgtatccgcctgagcatgaaagaagctgttgcgactgaagaaactccagca
cagcagcaggactcagcagaatag
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