Pseudodesulfovibrio thermohalotolerans: LF599_01520
Help
Entry
LF599_01520 CDS
T09613
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe00550
Peptidoglycan biosynthesis
pthe01100
Metabolic pathways
pthe01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LF599_01520 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LF599_01520 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pthe01011
]
LF599_01520 (mrdA)
Enzymes [BR:
pthe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LF599_01520 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pthe01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LF599_01520 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WFS62866
LinkDB
All DBs
Position
complement(317558..319432)
Genome browser
AA seq
624 aa
AA seq
DB search
MSDLYNESEQQAPRSGLVLLQALILGLFCLFAIRLWYLQIHRGEDYKIQALENQLRQESI
PSPRGLIRDRNGDLLAVNEPAYALGIIREDCPDVDRLVHQIATWTGKDYFELKTLYNKNR
KRVKPFEPLIIVPDLTFAQLAVVETNKLRWPGLEIQFRPRRLYRYGTLFAHVIGYVAEAD
EEDMGKRPELALGDYVGKQGIELMLEDRMRGAKGLTQYQVDVNGRRLKERVLKHPQAGHE
ISLSIDLGLQQLCMDWLSEEAGGVAVMDADTGQLWALATAPSYDSNDFSSGLSSKQWAKL
RDNPLHPMQNRVIQSVYPPGSIFKHVVAGAGLHYDMLDPNETVFCSGSMKLGRRVFRCWK
HWGHGKVDLNRALVESCDVYFYKLGKKLTVDRMSEFAHAVGFGHKTGIRLPHEKAGNIPT
REWKLKRFGESWQGGDNLNMSIGQGFTLVTPLQVVRFFAGVINGGKLLKPLLLKDENPVV
QSRIPLDDARLELLHKALIDTVEDRHGTCRRIRTKGVVVGGKTGTAQVVRLTDELKELKD
DEIPYRFRDHAWMAATAEKDGKRFAIACLVEHGLHGGSGSGPIVKAVIDYLFNGKVTPKP
EERKAKARAVRALSLKHKEKPRAN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctttataacgaatccgaacagcaggccccgcgctcgggcctggtcctgctc
caggcgctcatcctgggcttgttctgcctgttcgccatccggctgtggtacctgcaaatc
caccggggcgaggattacaagattcaggctctggaaaaccagttgcggcaggagtccatc
ccctcgccgcgcggactgatccgcgaccggaacggcgacctgctcgccgtgaacgaaccc
gcatacgcccttggcatcatccgcgaggactgcccggacgtggaccggctggtacaccag
atcgcgacctggaccggcaaggactatttcgagctcaagaccctctacaacaagaaccgc
aaacgggtgaaaccgttcgagccgctcatcatcgtcccggacctgaccttcgcccaactg
gccgtggtggagacaaacaagctgcgctggccaggcctggaaattcagttccggccccgc
aggctgtaccgatacggcaccctgttcgcgcacgtcatcggctacgtggccgaggcggac
gaagaggacatgggcaagcgccccgaactcgcgctgggcgactatgtgggcaagcaaggc
atagagctgatgctcgaagaccgtatgcgcggcgccaaggggctgacccagtaccaggtg
gacgtcaacggcaggcggctcaaggagcgcgtcctcaaacacccccaggccggtcacgaa
atatccctctccatcgacctgggccttcagcagctctgcatggactggctctcggaagaa
gcgggcggcgtggccgtcatggacgccgacaccggccagttgtgggccctggccacggct
ccgtcatacgactccaacgacttctcctcgggcctgagttccaagcagtgggccaagctc
cgcgacaaccccctgcaccccatgcagaaccgggtcatccagtcggtctatcctcccggc
tccatcttcaagcacgtggtggccggagccgggctgcattacgacatgctcgatcccaac
gagaccgtgttctgctccgggtccatgaaactcgggcgcagggtcttccgctgctggaaa
cactggggtcacggcaaggtggacctcaaccgcgccctggtcgaatcctgcgacgtgtat
ttttacaagctcggcaagaaactcaccgtggaccgcatgagcgaattcgctcacgccgtc
ggcttcggacacaagaccggaatccgactgccgcacgaaaaggcgggcaacatccccacc
cgcgaatggaagctcaagcggttcggcgaatcctggcagggcggcgacaacctgaacatg
tccatcggccaggggttcacgctggtcacgcccttgcaggtggtccgattctttgccggg
gtaatcaatggcggcaaactgctcaagcccctgctgctcaaggacgaaaaccccgtggtc
cagtcacggattccccttgacgacgcccgtctcgaattgctgcacaaggctcttatcgac
accgtggaagaccggcacggcacctgccgccgcatccgcaccaagggtgttgtcgtgggc
ggcaagaccggcacggcccaggtggtccggctgaccgacgaactcaaggaactcaaggac
gacgaaattccctacaggttccgggatcacgcatggatggccgccaccgccgaaaaggac
ggcaaacggttcgccatcgcctgcctcgttgagcacggactccatggcggctccggttcc
ggccccatcgtcaaggcggtcatcgactacctcttcaacggcaaggtgacgcccaagccc
gaggaacggaaagccaaggcccgcgccgtgcgcgccctgtccctcaagcacaaggagaaa
ccacgtgccaattga
DBGET
integrated database retrieval system
