Pseudodesulfovibrio thermohalotolerans: LF599_03905
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Entry
LF599_03905 CDS
T09613
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LF599_03905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pthe02000
]
LF599_03905
Transporters [BR:
pthe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LF599_03905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WFS63322
LinkDB
All DBs
Position
complement(859161..862265)
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AA seq
1034 aa
AA seq
DB search
MNPSALFVRRPVMTTLLMTAILVFGIMAYLRLPVSDLPNVDFPTIEVSAQLSGANPETMA
SSVATPLEKQFSTIAGLDSMTSISSLGSTRVTLQFDLERNIDDAALDVQSAITTALRRLP
DDMTSTPSFRKVNPADSPILYLSLSSPTMRLSNVNEFAENFMAQRISMVNGVAQVMVYGS
QKYAVRIQLSPEKLSSMELGVDEVAEAVRKGNVNLPVGTVAGPVREYIVRSSGKLMNAED
YKPLVVAWRKGAPVRLSDVADVFDSVEQTRRRNWYNGQPGMVLAIQRQPGTNTVEVVEAV
RALLPTFQAQLPAAVNLDVLYDRSESIKESIEDVQFTLLLTVALVITVIFLFLRRLSATI
IPSLALPMSIIGTFAVMHLYGFSLNNISLMALTLSVGFVVDDAIVMLENIVRHGEMGKST
MEAVMDGSREIAFTIVSMTISLAAVFLPVLFMGGIVGRLFHEFAVTICASILISGLVSLT
LTPMLCSLIIRPRSEEKRRGRIFNLFERGFEGLRNFYSATLDWTIRHHRLTMLASVLVLI
LTVVLFRAIPKGFLPTEDAGRLMVRTEAEQGVAFDIMKARQQRLMAIVSKDPAVEGYMSV
VGGGGPNRGGNSGRLMVDLKPRRERGPIEVVQQRLRAKLAQVPGVRSYVSNPPAIRIGGR
SSKGQYQYTLQSPDTEVLFLAAAEMEKRMRDLANVQDVSSDMEFDNPELAIDIDRDKASA
LGISAYQIEDALSTSFGNRKISSIYAPTDTYDVIMELAPQFQSNPDALAMLSVRSQNGRL
IRLETLAKWGLGVGPLSINHSGQLPSATISFNLPPGESLGSAVDAVSELAREVIPASVST
SFQGEAQAFQDSMRGLWVLLAMAILVIYLVLGVLYESFIHPLTILSGLPSAGVGALLTLM
LFGLDLNIYGFVGIIMLIGIVKKNAIMMIDFAVEAQREHGLRAAEAIREGALIRFRPIMM
TTMAALMGTLPIALGLGAGAEARRPLGLAVVGGLMVSQFLTLYFTPVYFMYLDAAQQWLN
RIFGKAEAVRPSSE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgtcagcccttttcgtccgacgcccggtcatgaccacactgctcatgaccgcc
atcctggtgttcggcatcatggcctatctgcggctgccggtcagcgacctgcccaacgtg
gactttccgaccatcgaggtctcggcccagctctccggcgccaaccccgagaccatggcc
tcgtccgtggccacgccgctggagaagcagttctcgaccatagcgggcctggactccatg
acctcgatatccagcctgggctccacgcgcgtcaccctccagttcgacctggagcggaac
atcgacgacgccgcgctggacgtgcagtcggccatcaccaccgccctgcggcggctgccc
gacgacatgacctccacgccgagcttccgcaaggtcaacccggcggactcgccgatcctc
tatctttcgctctcctcgccgaccatgcggctgtccaacgtcaacgagttcgccgagaac
ttcatggcccaacgcatctccatggtcaacggcgtggcccaggtcatggtctacggctcc
cagaagtacgcggtgcgcatccagctctcgcccgagaagctctcctccatggagctgggt
gtggacgaggtggccgaggccgtgcgcaagggcaacgtcaacctgcccgtgggcaccgtg
gccggtccggtgcgcgagtacatcgtccgctccagcggcaagctcatgaacgccgaggac
tacaagccgctggtggtggcctggcgcaagggcgcgcccgtgcgcctgtccgacgtggcc
gacgtcttcgactccgtggagcagaccaggcggcgaaactggtacaacggccagcccggc
atggtcctggccatccagcgccagcccggcacgaacaccgtggaggtggtcgaggccgtg
cgcgccctgctgcccaccttccaggcccaactgcccgccgccgtgaacctcgacgtcctg
tacgaccgttccgagtccatcaaggaatccatcgaggacgtccagttcaccctgctgctc
accgtggcgctggtcataacggtcatcttccttttcctgcgcaggctgtcggccacgatc
atcccgagcctggccctgcccatgtccatcatcggcaccttcgcggtcatgcacctctac
gggttcagcctgaacaacatctcgctcatggccctgaccctgtcggtgggcttcgtggtc
gacgacgccatcgtcatgctcgaaaacatcgtccgccacggggagatgggcaaatccacc
atggaggcggtcatggacggctccagggagatcgccttcaccatcgtctccatgaccata
tccctggccgccgtgttcctgcccgtgctcttcatgggcggcatcgtgggccgcctgttc
cacgaattcgcggtgaccatctgcgcctccatcctgatctccggactggtctccctgact
ctgacccccatgctgtgcagcctgataatccgtccccgctcggaagagaaacggcgcggc
aggatcttcaacctgttcgagcggggcttcgaggggctgcgcaacttctactcggccacc
ctggactggaccatccgccaccaccggctgaccatgctcgcgtccgtcctggtcctgatc
cttaccgtggtcctgttccgcgccattcccaagggattcctgcccaccgaggacgcgggc
aggctcatggtccggaccgaggccgagcagggcgtggccttcgacataatgaaggcgcgc
caacagcggctcatggccatcgtgagcaaggacccggccgtggaaggatacatgtccgtg
gtcggcggaggcgggcccaaccggggcggcaactccggcaggctgatggtcgacctcaag
ccccgccgcgaacgcggccccatcgaagtggtccagcagcggctccgagccaagctcgcg
caggtgcccggggtccggtcctacgtgtccaatccaccggccatccgcatcggcggacgc
agctccaaggggcagtaccagtacaccctgcaaagccccgacaccgaagtcctcttcctg
gccgccgccgagatggaaaagcgcatgagggacctggccaacgtccaggacgtctcctcg
gacatggaattcgacaaccccgagctggccatcgacatcgaccgcgacaaggcctcggcg
ctgggcatctccgcctaccagatcgaggacgccctctcgacatccttcggaaaccgcaag
atttcctccatctacgcccccaccgacacctacgacgtcatcatggagctggccccgcaa
ttccagagcaacccggacgccctggccatgctctcggtgcgctcgcaaaacggtagactc
atccgcctggaaaccctggcgaaatggggcctcggcgtggggccgctgtccatcaaccac
tcgggccaactgccttcggcgaccatctccttcaacctgccgccgggcgaatccctgggc
tcggccgtggacgccgtctccgagctggcgcgcgaggtgattcccgcctcggtgtccacc
agcttccagggcgaggcccaggcgttccaggactccatgcgcggcctgtgggtcctgctg
gccatggccatcctggtcatctacctggtcctcggcgtgctctacgagtccttcatccac
cccctgaccatcctgtccgggctgccgtcggcgggcgtgggcgcgctgctcacgctgatg
ctcttcgggctcgacctgaacatctacggcttcgtgggcatcatcatgctcatcggcatc
gtcaagaagaacgccatcatgatgatcgacttcgcggtggaagcccaacgcgaacacggg
ctgcgcgcggccgaggccatccgcgagggcgcgctgatccgcttccggccgatcatgatg
accaccatggcggcgctcatgggcaccctgcccatcgccctgggccttggcgcgggagcc
gaggcccggcgtccgctcggcctggccgtggtcggcgggctcatggtctcccagttcctg
actctctacttcaccccggtctacttcatgtacctggacgcggcccagcagtggctcaac
cgaatcttcggcaaggcggaagcggtgcgtccctcctccgaataa
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