Pseudodesulfovibrio thermohalotolerans: LF599_04885
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Entry
LF599_04885 CDS
T09613
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LF599_04885 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pthe03019
]
LF599_04885 (groL)
03110 Chaperones and folding catalysts [BR:
pthe03110
]
LF599_04885 (groL)
03029 Mitochondrial biogenesis [BR:
pthe03029
]
LF599_04885 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pthe04147
]
LF599_04885 (groL)
Enzymes [BR:
pthe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LF599_04885 (groL)
Messenger RNA biogenesis [BR:
pthe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LF599_04885 (groL)
Chaperones and folding catalysts [BR:
pthe03110
]
Heat shock proteins
HSP60 / Chaperonin
LF599_04885 (groL)
Mitochondrial biogenesis [BR:
pthe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LF599_04885 (groL)
Exosome [BR:
pthe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LF599_04885 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LF599_04885 (groL)
Exosomal proteins of breast cancer cells
LF599_04885 (groL)
Exosomal proteins of colorectal cancer cells
LF599_04885 (groL)
Exosomal proteins of bladder cancer cells
LF599_04885 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
divDNAB
FtsA
Lar_N
Motif
Other DBs
NCBI-ProteinID:
WFS63505
LinkDB
All DBs
Position
complement(1080871..1082523)
Genome browser
AA seq
550 aa
AA seq
DB search
MAKDILFDAKAREKLKAGVDKLANAVKVTLGPKGRNVVMEKSFGSPVITKDGVSVAKEIE
LEDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIFTEGVKLVAAGRSPMSIKRGID
KAVEAIVEDLEKVAKPTRDQKEIAQVGTISANNDATIGNIIAEAMNKVGKEGVITVEEAK
GLETTLDVVEGMQFDRGYLSPYFVTNTERMTCEMEEPLILINEKKVSNMKELLPVLEQCA
KMSKPLVIIAEDIEGEALATLVVNKLRGTLNVVAVKAPGFGERRKAMLKDIATLTGGQVV
SEDLGIKLENLTVNDLGSCKRIVVDKENTVIVDGAGKAAEIKGRIQQIRAEIAESSSDYD
REKLQERLAKIVGGVAVINVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVVLAR
SGKAALKVKAADDDEQAGINIITRAVEEPLRQIAANAGLEGSIVVEKIKEGKAGFGYNAA
TDNYEDLIKAGVIDPKKVTRTALQNAASVAGLLLTTECAIADKPEKADAAPAMPGGMGGM
GGMGGMGGMY
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagatattcttttcgatgccaaggcccgcgagaaactgaaagcgggtgtggac
aagctggccaacgcggtcaaagtcaccctcggacccaagggtcgcaacgtcgtgatggag
aagtccttcggctcccccgtcatcaccaaggacggcgtgtccgttgccaaggaaatcgag
ctggaagacaagttcgagaacatgggcgcccagatggtcaaggaagtcgcctccaagact
tccgacgtcgccggtgacggcaccaccaccgccaccgtcctggcccaggccatcttcacc
gaaggcgtgaagctggtcgccgccggtcgctcccccatgtccatcaagcgcggcatcgac
aaggccgtcgaagccatcgtcgaagacctcgaaaaggtcgccaagcccacccgcgatcag
aaagaaatcgcccaggtcggcaccatctccgccaacaacgacgccaccatcggcaacatc
atcgccgaggccatgaacaaggtcggcaaggaaggcgtcatcactgtcgaggaagccaag
ggtctcgaaaccaccctggacgttgtcgaaggcatgcagttcgaccgcggctacctctcc
ccctacttcgtcaccaacaccgagcgcatgacctgcgaaatggaagagcccctgattctc
atcaacgagaagaaggtctccaacatgaaggaactgctgcccgtgctggagcagtgcgcc
aagatgtccaagccgctggtcatcatcgccgaggacatcgaaggcgaagccctggccacc
ctcgtggtcaacaagctgcgcggcaccctgaacgtggtcgccgtcaaggcccccggcttc
ggtgagcgccgcaaggccatgctgaaggacatcgccaccctgaccggcggccaggtcgtt
tccgaagacctgggcatcaagctggagaacctgaccgtcaacgacctcggttcctgcaag
cgcatcgtcgtggacaaggaaaacaccgtcatcgtcgacggcgccggcaaggccgccgag
atcaagggccgcatccagcagattcgcgccgagatcgccgaatcctcttccgactacgat
cgcgagaagctccaggagcgtctggccaagatcgtgggcggcgtggccgtcatcaacgtc
ggtgccgccaccgagaccgagatgaaggaaaagaaggcccgcgtggaagacgctctgaac
gccacccgcgcggctgtcgaggaaggcatcgtgcccggcggcggcgtggttctcgcccgc
tccggcaaggccgccctcaaggtcaaggccgccgacgacgacgagcaggccggtatcaac
atcatcacccgcgccgtggaagagcccctgcgccagatcgctgccaacgccggtctggaa
ggttccatcgttgtcgagaagatcaaggaaggcaaggccggtttcggctacaacgccgcc
accgacaactacgaagacctcatcaaggccggtgtcatcgacccgaagaaggtcacccgc
accgctctgcagaacgccgcttccgtggcaggtctgctgctgaccaccgagtgcgccatc
gccgacaagcctgagaaggctgacgcggctccggccatgcccggcggcatgggcggcatg
ggcggaatgggcggcatgggcggcatgtactaa
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