Pseudodesulfovibrio thermohalotolerans: LF599_05240
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Entry
LF599_05240 CDS
T09613
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LF599_05240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pthe03000
]
LF599_05240
Transcription factors [BR:
pthe03000
]
Prokaryotic type
Helix-turn-helix
Other families
LF599_05240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
AAA
AAA_5
AAA_3
Mg_chelatase
HTH_8
Parvo_NS1
MCM
RBD
AAA_30
AAA_2
Motif
Other DBs
NCBI-ProteinID:
WFS63571
LinkDB
All DBs
Position
complement(1154439..1156019)
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AA seq
526 aa
AA seq
DB search
MATYTQDHSDLGYLHTLKTIQESLRQEQTLEEALNSLLKTLALDMEYVRAFMVIMDPKTE
NLKLSLTYSPAQSDDVTYSPGRGIIGRVFNSGQSISVPRMSDDPEFLNKAFGRSEEELRK
LGFICVPVINVRSDESEVIGALSVDVPLIPADDMAAHRDFLEVVAGIIAGHVAQLQEEMA
TQNHLLSQGLMAGGAEATPPKDFVAASKAMRLVLRQSAQVAPSRATALLRGESGTGKELL
AEAIHQASPRADKPLIKLNCAALPSELIESELFGHQKGAFTGAFQTKRGLFEVADQGTLF
LDEIGELSMDAQAKVLRAIQEKEIQRVGSEQTITVDVRLICATHQPLEELLEKGQFREDL
YYRINVFPIFIPPLKERREDILPLAEHFLADFTDEYGKEVKRISTPAIELLVMYHWPGNV
RELKNCMERAVLLCEEQVIRTYHLPPTLQSAESSATGTNLSFGEAVAKFEQELLVDSLKK
TGGNMLQSARDLRVSYRIVNYKVKKYNIDVKKYSQSKKKAKKKLEM
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctacacgcaggaccactccgatctcggctatctgcacacgctgaagaccatt
caggaatccttgaggcaggaacaaacccttgaggaagcgctcaactcgctcctgaagact
ctggccctggacatggaatacgtccgggcgttcatggtcatcatggaccccaagaccgaa
aatctgaagctctcgctgacctacagccccgcgcagtccgacgacgtcacatactcgccg
ggccggggcatcatcggccgggtcttcaattccgggcagtccatcagcgtgcctcgcatg
tccgatgatcccgagttcctgaacaaggcgttcggccgcagcgaagaggagctgaggaaa
ctcggcttcatctgcgtcccggtcatcaacgtccgctcggacgagtccgaagtcatcggc
gcgctgtccgtggacgtgcccctcatcccggctgacgacatggccgcccaccgcgacttc
cttgaagtggtggcgggcatcatcgccggtcacgtggcgcagttgcaggaggagatggcc
acccagaaccacctgctctcccagggacttatggcgggcggcgcggaagcgaccccgccc
aaggacttcgtggccgcctccaaggccatgcggctggtattgcgccagtccgcacaggtg
gccccgagccgtgccacagcgctgctgcgcggcgaatccggcacaggcaaggagctgctg
gccgaggccatccatcaggccagcccgcgcgcggacaagccgctcatcaagctcaactgc
gcggccctgccgtcagagctcatcgagtccgagctgttcggccaccagaaaggcgccttc
accggagcctttcagaccaaacgcggcctgttcgaggttgccgaccagggcacgttgttc
ctggacgaaataggcgagttgtccatggacgcccaggccaaagtgcttagggccatccag
gaaaaggagattcagcgggtcggcagcgagcagaccatcacagtggatgtgcgcctcatc
tgtgccacccaccagccgctggaggagttgctggaaaaaggccagttccgcgaggacctg
tactaccgcatcaacgtcttccccatcttcattccgcccctcaaggagcggcgggaggac
atccttcccctggcggaacacttcctggccgatttcaccgacgaatacggcaaggaggtc
aaacgcatctccacgcccgccatcgagctgctggtcatgtaccactggccaggcaacgtg
cgcgagctgaagaactgcatggagcgcgcggtcctgctctgcgaggagcaggtcatccgc
acctaccacctgccgcccacccttcagtcggcggaaagctcggccacgggcaccaacctc
tccttcggcgaggccgtggccaagttcgagcaggagctgctcgtcgattcgctgaagaag
accggcggcaacatgctgcaatccgcccgcgacctgcgcgtgtcctatcggatcgtcaac
tacaaggtgaagaagtacaacatcgacgtgaagaagtactcgcagtccaaaaagaaggcc
aagaaaaagctcgaaatgtaa
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