Pseudodesulfovibrio thermohalotolerans: LF599_05435
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Entry
LF599_05435 CDS
T09613
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pthe03110
]
LF599_05435 (clpB)
Chaperones and folding catalysts [BR:
pthe03110
]
Heat shock proteins
HSP100
LF599_05435 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
ATPase_2
Sigma54_activat
AAA_14
NACHT
nSTAND3
AAA_7
IstB_IS21
AAA_24
TniB
AAA_23
RNA_helicase
AAA_18
NBD_SMAX1
Roc
Zeta_toxin
ABC_tran
T2SSE
DUF447_C
TolA_bind_tri
Snapin_Pallidin
Motif
Other DBs
NCBI-ProteinID:
WFS63607
LinkDB
All DBs
Position
1193014..1195611
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AA seq
865 aa
AA seq
DB search
MDINTFTRKTQEAVSEAQNLAIRNGHQQIDCEHLMHALVAQENGLAGQILRKLGVAPDAY
LGAIDAEISRMPSVTGSGARPDQIVVTPRMQKTLVAADDMRKRMKDEYVSVEHVFVVLMD
EPSSTGVGKVNKQFGLDKNKVLTALEEVRGKQRVTSDNPEATYESLKKYGRDLVEEARSG
KLDPVIGRDSEIRRVIRILSRRTKNNPVLIGEAGVGKTAIAEGLAQRIVKGDVPEGLKDK
TVFSLDMSALIAGAKYRGEFEERLKAVLKEVAESAGQIIMFIDELHTIVGAGKTDGAMDA
SNILKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQTVLVEEPSVEDTISILRGLRE
RFEVHHGVRIADGAIVEAAVLSSRYITDRQLPDKAIDLIDEAAALIRTEIDSQPFELDTV
NRQVMQLEIEREALKRESDKASRERLADLEKKLAELKESQAAMLAQWENEKSSIERLRAL
KGEIEATRREIDEAKRIPDYNRAAELEYGKLPQLEKELADRNESLATGDAPRMVKEEVGP
DDIALVISKWTGIPVTRLMEGEREKLLRLADTLHERVIGQDQAVQAVADAVLRARAGLKD
PTRPIGSFIFLGPTGVGKTELCKTLASALFDTEDNMIRIDMSEYMEKHTVARLIGAPPGY
VGYDEGGQLTEAVRRKPYSVILFDEIEKAHHDVFNVLLQILDDGRLTDSHGRTVDFKNTI
VIMTSNLGAEFMLDGINATGEFKPGVEDQVREVLRRHFRPEFLNRVDETVLFRPLTQDQL
IGIIELLVRGLRSRLEDRNIGLTLTDRAKAFIAQSAYDPSFGARPLHRYLKHNLETPLAK
RLIAGELSDGETVTVDEREGELVFA
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaatacgttcactcgtaaaacacaggaagccgtctccgaggcccagaatttg
gccattcggaacgggcaccagcagatagactgcgaacatctcatgcacgccctggtggcg
caggagaacggccttgcgggccagatcctgcgcaagctcggcgtggccccggatgcctat
ctcggggctatcgacgccgagatctccagaatgccgtccgtgacgggttcgggcgcgcgc
ccggatcagatcgtggtcacgccgcgtatgcagaagacccttgtggccgccgacgacatg
cgcaagcgcatgaaggacgagtatgtctccgtggagcacgtgttcgtggtcctcatggac
gagccgtccagcaccggcgtgggcaaggtcaacaagcagttcggcctggacaagaacaag
gtcctgaccgctcttgaggaagtgcgcggcaagcagcgcgtgacctcggacaatcccgag
gccacctatgaatcgctcaagaagtacggccgtgatttggtggaggaggcccgttcgggc
aagctcgacccggtcatcggccgcgacagcgagattcgccgcgttatccgcattctttcc
cgccggaccaagaacaacccggtgctcatcggcgaggccggcgtcggcaagaccgccatc
gccgagggattggcccagcgcatcgtcaagggcgacgtgcccgaggggctgaaggacaag
accgtcttttccctcgacatgtccgccctgatcgccggggccaagtaccgtggcgagttc
gaggagcgactcaaggccgtgctcaaggaagtggccgagtccgccgggcagatcatcatg
ttcatcgatgagctgcacaccatcgtgggcgcgggcaagaccgacggagccatggacgcg
agcaacattctgaagcccatgctggcgcgcggcgaattgcattgtatcggcgcgaccacg
ctggacgagtaccggaagtacatcgagaaggacccggcgcttgaacgtcgtttccagacc
gtgctcgtggaggagccgtccgtcgaggacaccatctccattctgcgcggactgcgtgag
cggttcgaagtgcaccacggcgtacgcattgccgatggggccatcgtggaagcggccgtc
ctgtccagccggtacatcaccgaccggcagctcccggacaaggccatcgaccttatcgac
gaggccgcggctctgattcgtacggagatcgattcccagcccttcgagctggatacggtc
aaccggcaggtcatgcagcttgagatcgagcgcgaggccctgaagcgggagtccgacaag
gcgtcccgtgagcggctggccgatctggagaagaagctggccgagctcaaggagtcccag
gccgccatgctcgcccagtgggagaatgagaagtcctccatcgagcggctccgcgccctc
aagggcgagatcgaggccacccgccgcgagatcgacgaggccaagcggattcccgactac
aaccgggccgccgagctggaatacggcaagctgccccagttggagaaggagttggcggat
cgcaacgagtccctggccacgggcgatgctccgcgcatggtcaaggaagaggtcggtccg
gacgatatcgccctggtcatctccaagtggaccggcatcccggtcacccggctcatggaa
ggggagcgcgagaagctgcttcggctggccgacaccctgcacgagcgggtcataggccag
gatcaggccgtccaggccgtggccgacgccgtgctccgcgcccgcgcgggactcaaggac
ccgaccaggcccatcggctcgtttatcttcctcggccccacgggcgtgggcaagaccgag
ctgtgcaagaccctggcctcggccctgttcgacaccgaggacaacatgatccgcatcgac
atgtccgagtacatggagaagcataccgtggcgcggctcatcggcgcgcctccgggctac
gtggggtatgacgagggaggccaactgaccgaggccgtgcgccgcaagccgtactcggtc
attctgttcgacgagatcgagaaggcgcaccatgacgtgttcaacgtgctcctgcagatt
ctcgacgacgggcggctgacggattcccacggccggaccgtggacttcaagaacaccatc
gtcatcatgacctccaatctcggggccgagttcatgctcgacggcatcaatgcgacgggc
gagttcaagcccggggtcgaggaccaggtgcgcgaggtcctgcgccgccacttcaggccc
gagttcctgaaccgtgtggacgagaccgtgctgttccggccactgacccaggatcagctc
atcggcatcatcgagctgctcgtgaggggcctgcgctcccggcttgaggaccgcaacatc
gggctgacactgaccgatcgggccaaggcgtttatcgcccagtcggcctacgacccgtcc
tttggcgcgcggcctctgcaccgctacctgaagcacaacctggagacgcctctggccaag
cggctcatcgcgggcgagctgtccgatggcgaaaccgtcaccgtggacgaacgcgaaggg
gagcttgtcttcgcgtaa
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