Pseudodesulfovibrio thermohalotolerans: LF599_06345
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Entry
LF599_06345 CDS
T09613
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pthe03016
]
LF599_06345 (truB)
Enzymes [BR:
pthe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LF599_06345 (truB)
Transfer RNA biogenesis [BR:
pthe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LF599_06345 (truB)
Prokaryotic type
LF599_06345 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
WFS63781
LinkDB
All DBs
Position
complement(1367367..1368308)
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AA seq
313 aa
AA seq
DB search
MGRRSKKRSPFQLDGLLILNKPSGPTSTDCLNDIKHRLKQFKIGHGGTLDPMAEGVLLVL
LGQATKLAPYLSGGTKTYSGTFRLGITTDTLDIQGEILKESPVEATSADVEREILYWKEL
TEQEVPAYSAAKHEGKPLYALAREGLETPVKMKPIVISHVEALDVNPPEAAFRVSCSAGT
YIRSLVHSLGTRMGCGAALTSLVREASEPFRLDQAFDLEDVLEHPELFPERVIPLADTLP
HWPRYRLTEPLAGLVMNGSWLPVTDQPGTMLAGVLGDRAMLLGPDGSPLALVEAKLQDDK
PRWAILRGLWNRD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggacgccgatccaagaaacgcagcccgttccaactcgacggcctgcttatcctgaac
aagccgtccggccccacgtcgaccgactgcctgaacgacatcaaacaccgcctcaagcag
ttcaagatcggtcatggcggcaccctggaccccatggccgagggagtgctcctggtcctt
ctcggacaggcaaccaagcttgcgccgtacctttccggcgggaccaagacctattccgga
acatttcggctcggaataaccaccgacacgcttgatatccaaggggaaatactcaaggaa
agcccggtggaggccacttcggcagatgtcgaacgtgaaattttgtattggaaagagttg
acagagcaggaggttcctgcctattcggctgccaaacacgaggggaagccgctgtacgcc
ctggcccgcgaaggtctggaaacaccggtcaaaatgaagcccatcgtgatttctcatgtg
gaagcgctggacgtgaatccgcccgaagcggcattcagggtcagctgttccgcgggcacc
tacatacgatccctggtccacagcttggggacacgaatggggtgcggcgcggcgctgacc
agcctggtcagagaagccagcgagcctttccggctcgatcaggcctttgacctggaggac
gttctggagcacccggaattatttccggaacgggtgattccgcttgcggacaccctgcct
cactggccgaggtatcggttgaccgaaccgctggccggactcgtcatgaacgggtcctgg
ctgccggtgaccgaccaacccggtaccatgctggcgggcgtactcggcgatcgagccatg
ttgctcggtcccgacggctcccccctggcactggtggaggccaagcttcaggacgacaag
cccagatgggccattctccggggactctggaaccgggactga
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