Pseudodesulfovibrio thermohalotolerans: LF599_06490
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Entry
LF599_06490 CDS
T09613
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pthe03009
]
LF599_06490 (der)
Ribosome biogenesis [BR:
pthe03009
]
Prokaryotic type
GTPases
LF599_06490 (der)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
RsgA_GTPase
AIG1
Dynamin_N
ABC_tran
Roc
MMR_HSR1_Xtn
Arf
Ras
AAA_16
AAA_22
Guanylate_kin
SRPRB
NTPase_1
NB-ARC
AAA_18
Nuc_deoxyri_tr2
Motif
Other DBs
NCBI-ProteinID:
WFS63808
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Position
1396673..1398190
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AA seq
505 aa
AA seq
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MLPIVALVGRPNVGKSTLFNRLLRKSRSITHDMPGVTRDRIYGECIMGETRFDLIDTGGM
VLESEATPELSKDFEDEIFEQARDAIDEANAIVFVVDGKEGLTPLDQQAAEFVRRSGKPV
LMLVNKVDGSEFEAHMTAEFHSLGIDFLPVSAAHGYNLSEVRNRVRRFVKSLGLPTDVDD
GVEKGLRLTMLGRPNAGKSSLVNAIIGKDRLIVSDVAGTTRDSIDVTFEKQGKRYTFVDT
AGVRKRANIQDHLEKISVIRALKNSKRSDVTILTIDITLGVGRQDKRLIEFLAKEKTPFI
VVVNKADLIPRSETSRALEAFREELRVIPHVPVVMTSAVKGVGIGKLLPLAETLRRECEI
RVGTGELNRIMQAVVEKLQPPVVKRKRPKFYYVTQADEAIPTFVFFCNDHTLVKTSYVRY
LENQFRKMLGIKSAPVNIVFRSSHDKKEWEKTRGISALGKRGPGRERIGGAKTRRHELKY
KALKSKRRRDEKEAREKDGAGKKGK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgatcgtcgccttggtgggccgccccaatgtgggcaaatccacccttttcaac
cgacttctcagaaagtcgagatccatcacccacgatatgccgggggtgacgcgcgaccgc
atctacggtgagtgcatcatgggcgagacccggttcgaccttatcgataccggcggcatg
gtcctggaatccgaggccacgcccgagctgtccaaggactttgaggacgagattttcgag
caggcccgggacgccattgacgaagccaacgccatcgttttcgtcgtggacggcaaggag
gggctgacccccctggatcaacaggctgcggaattcgtgcgcaggtccggcaagccggtg
ctcatgttggtcaataaggtggacggcagcgaattcgaagcccacatgaccgcagagttt
cattccctgggcatagattttctgcccgtgtcggcggctcatggctacaatctgtccgaa
gtgcgcaatcgagtccgtcgatttgttaaaagcctcggtctgcctacggatgtggacgac
ggcgtggagaagggcttgcgcctgaccatgctcggccgccccaacgcgggcaaatcctcg
ctggtcaacgccatcatcggcaaggacaggcttatcgtctccgatgtggccggaactacc
cgtgactccattgatgtaaccttcgagaagcagggcaagcggtatacctttgtcgacacg
gctggtgtgcgcaagcgagccaacatccaggaccatctggagaagatcagcgtcattcgc
gcgctcaagaattccaagcggtccgacgtgaccattctgacgatcgacatcacgctgggc
gtggggcgtcaggacaagcggcttatcgagttcctggccaaggaaaagaccccgtttatc
gtggtggtcaacaaggcggaccttattccccgcagtgagaccagccgcgctctggaggcg
ttccgggaagagctgcgcgtgattccgcatgtgcccgtggtcatgaccagtgccgtcaag
ggcgtgggcatcggcaagctcctgcccctggccgaaaccttgcggcgggagtgcgagata
cgcgtcggcaccggcgagcttaatcgcatcatgcaggccgtggtggagaagctccagcct
cccgtggtcaaacgcaagcggcccaagttctattatgtcacccaggcggacgaggccatt
cccactttcgtgttcttctgcaacgatcacaccctcgtcaaaacgtcctacgtgcgctac
ctggagaaccagttccgcaagatgctcggcatcaagtccgcgcccgtgaacatcgttttc
cgctccagccacgacaagaaggagtgggagaagacccgcggcatctcggccttgggcaaa
cgcggcccgggccgcgaacgcatcggcggagccaagacccgcagacacgagctcaagtac
aaggcgctcaagagcaaacgccgccgcgatgaaaaagaggcccgggaaaaggacggagcc
gggaaaaaaggcaaatag
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