Pseudodesulfovibrio thermohalotolerans: LF599_07080
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Entry
LF599_07080 CDS
T09613
Name
(GenBank) DEAD/DEAH box helicase
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
HDA2-3
SWIM
Motif
Other DBs
NCBI-ProteinID:
WFS63919
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Position
complement(1517524..1520733)
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AA seq
1069 aa
AA seq
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MSSGEEQIVKSILQDFIGDSVPDYILESAHGIVADNGVAKLDLKKREQYWDIDGQVHGDD
FQNYTSEIGLNLSDRTINYYCNCPDSFSGVCRHVAATAVKLLKSLDTESGGGMPTPRTDW
RQTFRPFFATELEPEAGRHYLIYRIYPELGRLQVAFFRARQNKSGISQVQNEVTLSQIVE
NSDWCDTSPALPGVAEQIGHYLDYWGHKVEIPAGLHSWFFRAIKNEYYLYLRESDQPVTI
ESKTMQLKLSPTLSEDGLNFEILLAREDKMPFPITDEEEIYFYGRLPLWVYYKNSFYPVQ
TGLEPKLVQAMVEQKPIVPHADVSEFLDRVWTQIPVSDLYGQEDFLERVGPIFQDADYDP
KLYLDEEGSLLVLKIQNIYSNEHGEFIMPGPNPDLQTGSYHEGGKSYLIRRAQDEEARLL
SELQDMNFQPRNNHIWFMEQEEAINFLLDHYPQLVEAYRVYGEQNLTRYKVRTTQPQVVA
EVESDEEDKWFNLELAVQYDEQRVPIEVIWEAWTKGKRYVQLKDGSYTSLPESWLKRLGH
KLKALGFDPEKAPKQQFNQFEAPVLEKILEDLPQAQTDEFFVKLREKINNFEQIKIIAQP
KELQATLRPYQVQGLSYLNFLREYGFGGILADEMGLGKTIQTLSYIQSLVDNGVDGPNLI
IVPTSVLPNWEREAQKFVPGLKRLTIYGAKREGLFQHIKDSHLVITTYALLRRDLDELLK
YEYASVILDEAQNIKNPNTITARSVRKLDAGLRVCLSGTPIENNLFELWSLFEFLMPGFL
GSQHSFQRGIVKPIKDGDEETLDYLRTRVKPFILRRTKAEVAKDLPPKIETTHYCELVEE
QRELYNALAKKLKDQVLKDVDEKGMAKSQMSILDALLKLRQICCHPRLLKLNLPGVSTNL
PSGKFDAFKDLVVDIIEGGHKVLVFSQFVQMLHVIRNWLQIREIPFAYLDGSSKDRFEQV
DRFNEDPDIPIFLISLKAGGTGLNLTSADYVIHYDPWWNPAVENQATDRTHRIGQKRQVF
AYKMICQNTVEERILKLQEQKKDVAEAIIPGQSALKSLTRDDLEMLFEI
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcggtgaagaacagatagtcaaatccatattgcaggatttcattggcgatagc
gtccccgattacattttggagagcgcccatggaatcgttgccgacaacggcgtcgccaaa
ctggacctcaaaaagcgggaacagtactgggacatcgatggtcaggtacacggagacgat
tttcagaattacacttctgaaatcggcctgaacctgtccgacaggaccatcaactactat
tgcaactgcccggactccttttccggggtctgtcgtcacgtggcagccacggcggtcaag
ttgctcaagtccctcgacaccgaatccggcggcgggatgcccaccccgcgcacggactgg
cgacagaccttccgtccttttttcgccaccgaactcgaacccgaggccggtcgccattac
ctcatataccgcatctatccggaactcggccgcctacaggttgcttttttccgcgcccgc
caaaacaaatcgggcatatcccaggtgcagaacgaggtcactctgtcccagattgtcgag
aactccgactggtgcgacacttcgcccgccctccccggcgtggccgaacagatcggccac
tacctcgattactggggccacaaggtggaaatcccggcgggcctgcactcctggttcttc
agagcgatcaagaacgaatattacctctatctgcgcgaatccgatcagccggtcaccatc
gagtccaagaccatgcagctcaagctctcccccaccctgagcgaggatggcctgaacttc
gaaattctgctcgcccgcgaggacaaaatgcccttccccatcaccgatgaggaagaaata
tatttctacggccgcctgccgctctgggtctattacaagaactccttctacccggtgcag
accggcctggagcccaagctggtccaggccatggtggagcagaagcctatcgtcccccac
gccgacgtatccgaatttctcgaccgcgtctggacccagattccggtcagcgacctctac
ggccaggaggacttcctcgaacgtgtcggccccatcttccaggacgccgactacgatccc
aagctttacctcgacgaggaaggctccctgctcgtgctcaagattcagaacatctactcc
aacgagcacggcgaattcatcatgcccggccccaaccccgacctgcagaccggctcctac
cacgagggcggcaagtcctacctcatccggcgcgcccaggacgaggaggcccgcctgctg
agcgaattgcaggacatgaatttccagcccaggaacaaccacatctggttcatggaacag
gaggaagccatcaacttcctgctcgaccactatccccagctcgtggaggcgtaccgggtt
tacggcgagcagaacctgacccgctacaaggtccgcaccacgcaaccccaggtcgtggct
gaagtggagagtgacgaggaagacaagtggttcaacctcgaactggccgtgcagtacgat
gagcagcgcgtccccatcgaggtcatctgggaggcatggaccaagggcaagcggtacgtc
cagctcaaggacggctcctacaccagtctgcccgagtcctggctgaagagactcggccac
aagctcaaggcactgggcttcgatcccgagaaggcacccaagcagcagttcaaccagttc
gaggccccggtgctcgaaaagattctggaagacctgccccaggcccagaccgacgaattt
ttcgtgaagttgcgcgaaaagatcaacaacttcgaacagatcaagatcatcgcgcagccc
aaggaattgcaggcaaccctgcgcccctatcaggttcaggggctcagctacctgaacttc
ctgcgcgaatacggcttcggcggcatcctcgcggacgaaatgggactcggcaagaccatc
cagaccctgtcctacatccagtccctggtggacaacggcgtggacggcccgaacctcatc
atcgtgcccacatctgtcctgcccaactgggaacgcgaggcgcagaaattcgtgcccggc
ctgaaacggctgaccatttacggtgccaagcgcgaaggcctgttccagcacatcaaggac
tcacacctggtcatcaccacgtacgccctgctccggcgcgacctggacgagctgctgaaa
tacgaatacgccagcgtcattctcgacgaagcccagaacatcaagaacccgaacaccatc
accgcccgttccgtgcgcaaactcgacgcgggcctgcgcgtctgcctgtcgggcacgccc
atcgaaaacaacctgttcgagctctggtcattgttcgaatttctcatgcccggcttcctc
ggttcacagcattccttccagcgcggcatcgtcaagcccatcaaggacggcgacgaagag
acgctggattacctgcgcacccgggtcaagccgttcatcctccgccgcaccaaggccgag
gtggccaaagacctgccgcccaagatcgagaccacccactactgcgaattggtggaggaa
cagcgcgagctctacaacgccctggccaagaagctcaaggaccaggtcctcaaggacgtg
gacgaaaagggcatggccaagagccaaatgtccattctggacgccctgctcaaactccgc
cagatctgctgccacccgcgcctgctcaagctcaacttgcccggcgtgtccaccaacctg
ccttcgggcaagttcgacgccttcaaggatctggtggtggacatcatcgaaggcggccac
aaggtgctggtcttctcccagttcgtgcagatgctccatgtcatccgcaactggctgcaa
attcgggaaattcccttcgcctatctggacggttcctccaaggaccgctttgaacaggtg
gaccgcttcaacgaggacccggacattcccatcttcctcatatcgctgaaggcgggcggc
accggcctgaacctgacctccgcggactacgtcatccactacgacccgtggtggaacccg
gccgtggaaaaccaggcgacggaccgcacgcaccgcatcggccagaagcgccaggtcttc
gcctacaagatgatctgccagaataccgtggaagagcgcatcctcaaattacaggagcag
aagaaggacgtcgccgaagccatcattcccggccagtcggccctgaagagcctgacccgc
gacgatcttgagatgctttttgaaatttaa
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