Pseudodesulfovibrio thermohalotolerans: LF599_09515
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Entry
LF599_09515 CDS
T09613
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LF599_09515 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pthe03400
]
LF599_09515 (mutS)
DNA repair and recombination proteins [BR:
pthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LF599_09515 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
nSTAND_NTPase5
AAA_29
AAA_27
Rad17
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WFS60919
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Position
2004723..2007332
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AA seq
869 aa
AA seq
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MLEQYLRFKEENPGCLLFFRMGDFYELFFEDAEVVSRAVQIALTSRNPNDENPIPMCGMP
HHSVEPYLSQLLDKGYKIAVCDQIEDPKEAKGLVKRDVTRVLTPGTVVEDSNLKSKANNY
LGALYWDSSKDAGGIAWLDFSTGQWSGLYSRKEPELWQWMVKIDPSELLLPQGIKVPPQF
IDLAGQVTSVAPGAFFDLAGARNRVLEMQKVTDLESLGLKGKDELVRACGALLTYLDQTQ
KGEFGHLGEFKPLNLGKHLLLDEVTERNLEIFRRLDGRTGLGTLWQVMDRTMTPMGGRLL
EARLRQPWRNLTPIEKTQECVAFLFERDRLRGDIRHGLDSVYDLERLSTRIFLGRANPKD
FIALRRSLTMLPPLRKLLAEEESLEQAQELKRIFNKWDAMEDLCALLDAALVDSPPPVIT
DGGLFRKGYDPVLDELIELNEHGEDRLKELHQAELAKSDIPKLKLGFNKVFGYYFEVSKA
YKGQVPDHFIRRQTLVNSERYITPELKELEDRIISASEERKSLEYKLFQELRELLAKARS
RFLFMADVVASLDYWQGLAEAARVNEWTRPVLHEGLEIDIEQGRHPVVEAAMGASNYIPG
DLRMDESRRILLITGPNMAGKSTVLRQVAIMTIMAQIGSFVPARSARIGLADRVFSRVGA
SDNLAQGHSTFMVEMTETARILRQATKRSLVILDEIGRGTSTYDGLSLAWAVVEELSTRA
GGSVRTLFATHYHELTSLEGKIEGLRNLNIAVKEWKGDIVFLRRLVPGPADRSYGIEVAR
LAGVPRPVVERAREILAKLEEKSQDSQAKGAVDRASQTLLPGFGAPPIKIDRELCEHPII
TQLTDLDVDGMTPIQALMLLNQWKDMIKD
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagcagtacctccgcttcaaggaggaaaacccgggctgcctgctttttttccgc
atgggcgacttttacgagctcttcttcgaggacgccgaggtcgtttcccgcgctgtccag
atcgccctgaccagccgtaatcccaacgacgaaaatcccattcccatgtgcggtatgcct
caccattcggtggagccctacctgagtcagcttctcgacaaggggtacaagatcgctgtc
tgcgaccagatcgaggaccccaaggaggccaaggggctggttaaacgcgacgtaacccgc
gtgctcacccccggcaccgtggtcgaggattccaatctcaagtccaaggccaacaactat
ctcggcgcactctattgggacagctccaaggacgccggcggcatcgcctggctcgatttt
tccacggggcaatggtccggcctatacagccgcaaggagccggagctgtggcaatggatg
gtcaagatcgacccgagcgaattgcttctcccgcaggggataaaggtaccgcctcagttc
attgacctggccggtcaggttacgtccgttgctcctggcgcgttcttcgatttggccgga
gcgcggaaccgcgttctggagatgcagaaggttacggacctggaaagcctcggccttaag
ggcaaggatgaacttgtcagagcgtgcggagcgctccttacctatctggaccagacacag
aaaggcgaattcggacatttgggcgaattcaagccgctcaaccttggcaagcatcttctc
ctcgacgaagtaaccgaacgcaatcttgagattttccgtaggcttgacggcagaaccggc
ctcggtaccctgtggcaggtcatggatcggaccatgacgccgatgggcggtcgtttgctg
gaagcccgcctgcgacagccgtggcgcaatcttacgcccatcgaaaagacccaggagtgc
gtcgcttttctctttgaacgcgaccgcctgcgtggcgacatccggcacggcctggattcg
gtctacgatctggaacggctctctacccgtatttttcttggccgtgcgaatcccaaggat
ttcatagccctgcgccgcagtttgaccatgctccccccacttcgcaagcttcttgccgaa
gaggaatcactggagcaagcccaggagttgaagcgtatctttaacaaatgggacgccatg
gaggacctgtgcgccctgcttgatgccgctctggtggacagccctccgcccgtaatcacg
gacggcggcctgttccgcaaaggatacgatccggttctggatgagcttatcgagctcaat
gaacacggcgaggaccggctcaaggagctgcatcaagcagagctggccaaaagcgatatt
cccaagctcaagctcggtttcaacaaggttttcggctattacttcgaggtttccaaagcc
tacaagggacaggtgccggaccacttcatccgccgtcagaccctggtcaacagcgaacgg
tacatcactcccgagttgaaggagcttgaggacaggatcatttccgccagtgaagaacgc
aagagcctggaatacaaattgttccaggagttgcgcgaattgctggccaaggcccgttcc
cggttcctgttcatggccgacgtggtcgcctcgctggactactggcagggactggccgag
gccgcacgggtcaacgaatggacccggcctgttctgcacgaagggcttgagattgatatc
gagcagggacgccatcctgtggtcgaggcggctatgggcgcgtccaactacatccccggc
gacctccgaatggacgagagccgccgcatcctgcttattaccggcccgaacatggcaggt
aaatccacggtgctgcgccaggtggcgatcatgaccatcatggcgcagatcggctccttt
gttccggcccggagcgcacgcatcggtctggcggaccgtgtcttttcgcgggtgggcgct
tcggacaatctggctcaggggcactccacattcatggtcgaaatgaccgagaccgcgcgc
atcctgagacaggccaccaaacggagcctggtcattctcgacgagatcggccggggcacc
agcacctacgacggcctttcgctcgcctgggccgtggtcgaggaattgtccactcgcgcg
ggcgggtcggttcgcactctgttcgccacccattatcacgaattgaccagcctggaaggc
aagatcgagggactgcggaacctcaacatcgcggtcaaggagtggaaaggggatatcgtg
tttttacgcaggcttgttcccggaccggcagatcggagctacggcatcgaagtggcccgt
cttgccggggtgccccgccccgtggtggagcgcgccagggaaatccttgcgaagctcgaa
gaaaaatcgcaggatagtcaggctaaaggggctgttgaccgcgcgtcccagaccttgctg
cccggcttcggcgcaccgcccatcaagatcgaccgcgagttgtgcgaacacccgattatt
acccagctcacggacctggacgtggacggtatgactcccatccaggcgcttatgcttctc
aatcagtggaaggacatgattaaggactga
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