Pseudodesulfovibrio thermohalotolerans: LF599_09835
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Entry
LF599_09835 CDS
T09613
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pthe03019
]
LF599_09835 (rapZ)
Messenger RNA biogenesis [BR:
pthe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LF599_09835 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_33
AAA_16
AAA_18
AAA_29
AAA_22
CoaE
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
WFS60981
LinkDB
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Position
complement(2069420..2070301)
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AA seq
293 aa
AA seq
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MTSNNSFPVVIVTGLSGSGKSTALRVFEDLGFFCIDGLPSEMSPKLADLILKFDTKYRGL
ALGMDLRQLEFVDGWAQALEGFRELGITPQVLFLEAKMAELVRRYATTRRPHPLEYGNLG
LEQALEKEKQLLELVRSQAALVLDTTDYSIHDLRRVIQTKWSALEDVGMGMRVHIITFGF
KYGVPSEADLVFDLRFLPNPYFDKSLRPMSGMDKAVSDYVLNNPAGSGFIKRFHEFLLYI
LPLYADEGRYRITLALGCTGGRHRSVSVAESVLATLKEKGYTVSIEHRHMELG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgaacaattcctttcccgtggtcatcgttaccggactctcgggttccggcaag
agtacggctcttcgggttttcgaagacctcggcttcttttgtatcgacggcctgccgtcc
gaaatgtcgcccaagctggctgaccttattctcaagttcgataccaagtatcgggggctt
gcgctaggcatggacctgcgccagctcgaatttgtggacggatgggctcaggcgctggaa
ggttttcgagaactcggcatcaccccgcaggtccttttccttgaggcaaagatggctgag
ctggtccgtcgttacgccacgacccgtcggccgcatccgctggagtatggcaatctcggg
ttggaacaggctttggagaaggagaaacagcttcttgagttggtgcgttcccaggccgct
ttggttctggataccacggactattcgatccatgatttgcgccgggtcattcaaacaaaa
tggtcggcccttgaggacgtgggcatgggtatgcgggtgcatatcatcaccttcggcttc
aagtacggcgtgccctccgaggcggatttggtctttgacctacgttttctgcccaacccc
tatttcgacaaatcgttgcgtcccatgtccgggatggacaaggccgtatccgattatgtc
ctcaacaaccccgccggaagtggtttcatcaagcggtttcatgaattcctgctttatatc
cttcccctttatgcagatgaagggcgctacaggataaccctggcgctggggtgcaccgga
ggccggcatcggtcggtatccgttgccgagtcggtactggcgacactcaaggaaaaaggc
tatacagtatcgattgaacatcgacacatggaactcggatag
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