Pseudodesulfovibrio thermohalotolerans: LF599_10465
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Entry
LF599_10465 CDS
T09613
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe02020
Two-component system
pthe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LF599_10465
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LF599_10465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pthe03021
]
LF599_10465
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pthe02035
]
LF599_10465
Transcription machinery [BR:
pthe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LF599_10465
Bacterial motility proteins [BR:
pthe02035
]
Flagellar system
Flagellar assembly proteins
Stator
LF599_10465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
PhyR_sigma-like
HTH_15
Motif
Other DBs
NCBI-ProteinID:
WFS61101
LinkDB
All DBs
Position
2199821..2200606
Genome browser
AA seq
261 aa
AA seq
DB search
MAILNSSGRSSSSMNDPWLELEQGVRHWDDFSPRDRENIVRYYSPKIRILALRLKAKLPQ
SVELNELISAGSLGLLDALGKFNPELGIKFDTYSENRIKGAMLDELRRMDWFSRGLRQKV
KVLEDSMRQIEHETGSPATTEQLCELTGMSDREVQQGLEALNNQVCLSLDSFQDNLIGPK
KMTDNEPFQSAAFQEIVDKVANLIEELTPREKLVISLYYGEELNMKETSEVMDITEGRVS
QLHSQALNKLRKTFRARYENE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattaaattcttctggaagaagctcctcttccatgaacgatccgtggcttgag
ctggaacaaggcgtcaggcattgggacgatttttcgccgagggaccgggaaaacatcgtt
cgatactactcgcccaaaatccgcatcctggccctgcgactcaaggcgaagctgccacag
agcgtcgagctcaacgagctcatcagcgcgggcagcctcggccttttggacgccctcgga
aagttcaacccggaattggggatcaaattcgacacctattcggagaaccgcatcaagggg
gccatgctcgacgaactgcggcgcatggactggttctccagggggctgcgccagaaggtc
aaggtgcttgaggactccatgcgccagatcgagcacgagaccggctctcccgccaccacc
gaacagttgtgcgaactcaccggcatgtcggaccgggaagtgcagcaggggcttgaggcc
ctgaacaaccaggtctgcctgagtctcgattccttccaggacaatctcatcggcccaaaa
aaaatgaccgacaacgagccgttccagtcggccgccttccaggagattgttgacaaagta
gccaatctcattgaagaattgactccaagagaaaaattggtcatatctctttattacggg
gaggagttgaacatgaaggagacctccgaggttatggacataaccgagggccgcgtttca
cagcttcactcccaggccttgaataaattgagaaaaacgttcagagctcgctacgaaaac
gagtag
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integrated database retrieval system
