Pseudodesulfovibrio thermohalotolerans: LF599_11555
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Entry
LF599_11555 CDS
T09613
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LF599_11555 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pthe03400
]
LF599_11555 (priA)
Enzymes [BR:
pthe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LF599_11555 (priA)
DNA repair and recombination proteins [BR:
pthe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LF599_11555 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_3primeBD
AAA_16
AAA_30
PIF1
nSTAND_NTPase5
DUF2321
SLFN-g3_helicase
ATPase_2
T2SSE
AAA_22
nSTAND6
IBR_1
NPHP3_N
SRP54
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
WFS61308
LinkDB
All DBs
Position
complement(2411103..2413466)
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AA seq
787 aa
AA seq
DB search
MADLWLVTLVSPPYETWTYGRPSHFPTLSPGQRVIIPFGKSHRAGVVVGPADEAPKGVAV
KDMIWPLEHTPLLDGDFVDMAVNLAARQMVHVGRILEIALPRGLRTASVTFKVDRHMTGR
NLPASMRPSDLARAGDEDRAALLELWLGDRMRVRVNAKKEAEERFVSLESDPPWAVRPNA
KRQLRLLEYLMENGPQSLYSLRHTLGDWAPDVAAKLEAAGVVRVGEPTADLLAQMDETGK
GCEDPGCEYVLTDEQQLALKEMTETLEEGGGAHLVHGVTGSGKTVLYMEMADRLLRQGRS
VLFLAPEVALACQLYRTVAHRFPQYRTIFYHGYQSPGKREASFRELAGSGDPVIVVGTRS
AVFLPLPDLGMVVMDEEHDESFKQEERLAYHAKEVAWFRTGRSKGLLLLGSATPDVKTFH
AASQGLIRVSTLKERVGESRLPEVELVNITDLGSSKQLLSNRVREAVRETVAAGEQVIVM
LNRRGYAPLMYCLDCGETVRCPDCEVGMTYHKGRERLVCHYCGRTYAYPLTCRKCGGANF
IPMGEGTEQLEEALSDLLPDDAKVLRLDRDATRRQERLEEILGSFGRGEAQVLVGTQMIS
KGHHFPGVTLVVVADGDLGLNLPDYRSSERTFQLLVQVAGRAGRGEHPGRVLIQTRNPNH
PIWKEILGGDYKGFFAREVSRRTLFHYPPFSRMALVRISFPAESENGQAAVNLLGQILRE
QGRALGISVLGPAPAPLSMLRGRKRFNCLLKSDDWGKVRGLYAAMAHANPDPRDVRTALD
LDPLSTL
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggccgatctctggctggtaacgctcgtcagtccaccctatgaaacgtggacctacggg
cggccttcccatttcccgaccctgtcgcccgggcagcgggtaatcattccctttggcaag
tcgcatcgcgccggcgtggtggtcggcccggcggacgaggcccccaagggcgtcgcggtg
aaggatatgatctggccgcttgagcatacgccgcttctcgatggcgatttcgtggacatg
gccgtgaacctcgccgcccggcagatggttcatgtgggccgtatcctggagatcgccctg
ccgcgcggcctgcgcacggcctcggtgaccttcaaggtggaccggcacatgaccgggcgc
aacctgcccgcgtccatgcgtccttccgacctggctcgggcgggggatgaggacagggcc
gcgctcctggaactttggcttggcgaccgtatgcgcgtgcgcgtcaatgcgaagaaggag
gccgaggagcggttcgtctctcttgaatccgatcccccgtgggccgtccgcccgaacgcc
aagcggcagcttcggcttttggagtatctcatggagaacgggccgcagagtctttattct
ctgcggcacaccctgggcgactgggcgccggacgtggccgccaagctcgaagcggccgga
gtggtccgcgtgggcgaaccgaccgccgatcttctggcgcagatggacgagaccgggaag
ggatgcgaggacccgggctgcgagtacgtcctgaccgacgagcagcagttggcgctgaag
gaaatgaccgagactcttgaggagggcggcggcgcgcaccttgttcacggcgtgacgggc
agcggcaagaccgtgctctatatggagatggccgatcggctgcttcggcaggggcggtcc
gtgctgtttctcgcgcccgaggtggccctggcctgtcagctctaccgcaccgtggctcat
cgttttccgcagtacaggaccattttttatcacggttaccagagtccgggaaagcgggag
gcttcctttcgcgagctggccgggagcggggaccctgtcatcgtggtcggaaccaggtcc
gccgtgtttctgcccctgcccgatctgggcatggttgtcatggacgaggagcacgacgag
tccttcaaacaggaggagcggctggcctatcacgccaaggaggtggcctggttccgcacg
ggccggagcaaggggctgcttctgctcggttcggccacgccggacgtcaagacattccac
gccgccagccaggggcttatccgcgtgtccaccctgaaggagcgcgtgggggagagccgt
ctgcccgaggtggagctggtcaacatcaccgacctgggcagttcgaagcagcttttgtcg
aatcgcgttcgcgaggccgtgcgcgagaccgtcgcggccggagagcaggtcatcgtcatg
ctcaaccggcgcggctacgctccgctcatgtattgtctggactgcggcgagaccgtgcgc
tgcccggactgcgaggtgggcatgacctaccacaaggggcgcgagcggctggtctgccac
tattgcgggcggacctatgcctatcccctgacctgccgcaagtgcggcggcgcgaatttc
attcccatgggcgaaggcacagagcagttggaggaagcgttgagcgacctgctgcctgac
gacgccaaggtcctgcgcctggaccgggacgccacccggcggcaggaacgtctggaggag
atactcggttccttcggcaggggcgaggctcaggtcttggtgggaacccagatgatttcc
aagggccatcatttcccgggcgttactttggtggtggtcgccgacggcgatctcggcctg
aacctgcccgactaccgctcctcggagcggacgttccagctccttgtccaggtggctggc
cgtgccgggcgcggggagcatccgggcagggtgctcattcagacgcgcaaccccaatcat
ccgatttggaaggaaatcctcggcggcgattacaaaggatttttcgcccgcgaagtatcc
aggcgcacactttttcactacccgccgttttcgcggatggccctcgtgcgcatcagtttt
ccggctgagtccgagaacgggcaggccgccgtgaatctcctcggccaaatcctgcgcgag
cagggcagggcgctcggcatttccgtgcttggcccggccccggcgcctctgtccatgctg
cgcggccgcaagcgattcaactgcttgctcaagtccgacgactggggcaaggtccgcggg
ctgtatgcggccatggcccatgccaatcccgatccgcgcgacgtgcgcaccgcgctcgac
ctcgaccctctgtccactctctag
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