Pseudodesulfovibrio thermohalotolerans: LF599_11905
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Entry
LF599_11905 CDS
T09613
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe00220
Arginine biosynthesis
pthe00240
Pyrimidine metabolism
pthe00250
Alanine, aspartate and glutamate metabolism
pthe01100
Metabolic pathways
pthe01110
Biosynthesis of secondary metabolites
pthe01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LF599_11905 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LF599_11905 (carB)
00220 Arginine biosynthesis
LF599_11905 (carB)
Enzymes [BR:
pthe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LF599_11905 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
WFS61375
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Position
complement(2485179..2488412)
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AA seq
1077 aa
AA seq
DB search
MPKRTDIKKIMLIGSGPIVIGQACEFDYSGTQALKALKEEGYEVVLVNSNPASIMTDPEL
ADATYIEPIEPETVARIIEKERPDALLPTLGGQTGLNTALAVADMGVLEKYDVELIGADI
DVINKAESREEFRAAMQNIGLGMPESGICRSMDDVREWGEKIPFPIIVRPAYTLGGSGGG
VAYNMEELEQICANGLALSMKHEIMLERSILGWKEYELEVMRDKKDNCVIICSIENLDPM
GVHTGDSVTVAPAQTLTDDEYQRLRDASLAVMREIGVETGGSNVQFAINPEDGELIIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPAIDYCVVKIPR
FTFEKFPGTDDYLTTAMKSVGETMAIGRTFKEALQKGLRSLETGHFGLGGEFHDLEFDKN
EILKLLHRPNSQRIYALRGALLCGMTEEELHEATKIDPWFLRQFADIIAMERELIEFGKR
EGVTPEADGMAEMLRKAKEFGYSDPQLAAMWRISEDMVRSLRKELGVQPTYYLVDTCAAE
FEAYTPYYYSTYESGQENVREDRKKIVILGGGPNRIGQGIEFDYCCCHSSFTLKELGVES
IMVNSNPETVSTDYDTSDKLYFEPLTFEDVMNIIEFEKPDGVIVQFGGQTPLNLALRLMN
AGVPLIGTSPDAIDRAEDRERFKQFLNKLNLRQPANGTAMSMVEAREIASKLGFPLVLRP
SYVLGGRGMDIVYSMDEFDHYFRHSALVSPEHPTLIDKFLEYAIEVDVDALADGEDVYIG
GVMEHIEEAGIHSGDSASVLPPYSLSAELIREIERQTIAMAKELGVVGLMNVQFAIKDHE
VYIIEVNPRASRTVPFVSKATGVPLAKLATRVMLGEKLKDLNPWTMRKRGHVSVKESVFP
FNRFPNVDVLLGPEMRSTGEVMGIDPSFGLAYMKSQLGAGQKLPTSGTVFMSVNDWDKAK
IVLVAKDFEAMGFKIAATGGTAEFLASKGVNVEKVHKVHEGQRPHVIDHIKNGVFDLVIN
TPSGKKTVGDAKMIRQNALLYGLPYTTTVSGARAVVQAICELRQTGLQVKSLQEYYG
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgcacagatattaagaagatcatgctgatcgggtccggccccatcgtcatc
ggccaggcctgcgagttcgattattccggtacccaggccctcaaggcgctcaaggaggag
gggtacgaggtagtcctggtcaactccaatccggcctccatcatgaccgatccggagctg
gccgacgctacctatatcgagccaattgagcccgaaaccgttgcccgaatcattgagaaa
gagcgtcccgacgctcttttgccaactttgggggggcagaccgggttgaacacggccttg
gccgtggccgacatgggcgtgctcgaaaaatatgacgtcgaactcatcggcgcggatatc
gacgtcatcaacaaggcggaatcccgtgaggaattccgcgccgccatgcagaacatcggc
ctggggatgcctgagagcggcatctgccgaagcatggacgatgtccgcgagtggggcgag
aagatcccgtttccgatcattgtccggcccgcttacactctgggcggctcgggcggcggc
gtggcctacaacatggaggagctggagcagatttgcgccaacggcctggccctgtccatg
aagcacgagatcatgctcgaacgctccatcctcggctggaaggagtacgagctggaggtc
atgcgggacaagaaggacaactgtgtcatcatctgctccatcgagaacctggaccccatg
ggcgtgcacaccggcgactcggtgaccgtggccccggcccagaccttgacggacgacgag
tatcagcgcttgcgcgacgcctcgctggcggtcatgcgcgagatcggcgtggaaaccggc
gggtccaacgtccagttcgcgatcaatcccgaggacggcgaactgataatcatcgagatg
aacccgcgcgtgtcccgttcctcggccctggcctccaaggccacaggcttccccatcgcc
aagatcgcggccaagctggccgtgggctacaccctggacgagattcccaacgacatcacc
cgcgagaccatggcctcctttgagccggccattgactattgcgtggtcaaaattcccagg
ttcaccttcgagaagtttcccggcaccgatgattatctgaccacggccatgaaatccgtg
ggcgagaccatggccatcggacggaccttcaaggaggcgttgcagaagggccttcgctcg
cttgaaaccggccatttcggtctgggcggcgagttccatgacctcgaattcgacaagaac
gagattctcaagcttttgcaccgccccaactcccagcgcatttacgccctgcgcggcgcg
ctgttgtgcggcatgaccgaggaggaactgcacgaggccaccaagatcgatccgtggttc
ctgcgccagttcgccgacattatcgccatggagcgcgagcttatcgagttcggcaagcgc
gagggcgtgaccccggaggccgacggcatggccgaaatgcttcgcaaggccaaggagttc
ggttactccgatccgcaactggcggctatgtggaggatcagcgaggatatggtgcgctcc
ctgagaaaggagcttggcgtccaacccacctattatctcgttgatacctgcgctgcggag
ttcgaggcctatactccatattattactccacttacgagagtgggcaggagaacgtccgc
gaggaccgcaagaagatcgtcatcctgggcggcggaccgaaccgcatcggccagggcatc
gagttcgactactgctgctgtcattcctccttcacgctgaaggagctgggcgtggagtcg
atcatggtcaactccaacccggaaaccgtctccacagactacgacacctcggacaagctc
tacttcgagcccctgaccttcgaggatgtcatgaacatcatcgagttcgagaagccggac
ggcgtcatcgtgcagttcggcggccagaccccgctcaacctcgcgctcaggctgatgaat
gcgggcgtgccgctcataggcaccagcccggacgccatcgaccgcgccgaggaccgtgag
cggttcaagcagttcctgaacaagctgaatctcaggcagccggccaacggaacggccatg
tccatggtcgaggcgcgcgagatcgcgtccaagctcggcttccccctggtcctgcgcccg
tcctacgtgctcggcggcaggggtatggacatcgtctactccatggacgagttcgaccac
tatttccgccattcggctctggtttccccggagcatccgaccctcatcgacaagttcctc
gaatacgccatcgaagtggacgtggatgcccttgccgacggcgaggatgtctatatcggc
ggggtcatggagcacatcgaggaggcgggcatccactcgggcgactccgcctcggtgttg
ccgccgtactccctgtccgccgagctcattcgcgagatcgagcggcagactatcgccatg
gccaaggagctgggtgttgtcgggctgatgaacgtccagtttgccatcaaggaccatgag
gtctacatcatcgaggtcaacccgcgtgcctcgcgcacggtgcccttcgtgtccaaggcc
acgggcgttcccctggccaagctggccacccgggtcatgctcggcgagaagctcaaggac
ctcaatccctggaccatgcgcaagaggggacacgtctcggtcaaggagtccgtgtttccg
ttcaaccgcttccccaacgtggacgtgctgcttggacccgagatgcgttccaccggcgag
gtcatgggcatcgacccgagtttcggtctggcctacatgaagtcgcaactgggcgcgggc
cagaagctgcccacctcgggcacggtcttcatgtccgtcaacgactgggacaaggccaag
atcgtgctggtggcaaaggacttcgaggccatgggcttcaagatcgcggccacgggcggc
accgctgagttcctggcgagcaagggcgtcaatgtggagaaggtccacaaggttcacgaa
ggccagcggcctcacgtgatcgaccatatcaagaacggagtcttcgacctggtcatcaat
acgccctcgggaaaaaagaccgtgggcgacgccaagatgatccgtcagaatgcgcttctg
tacggcctcccttataccactacggtgtccggggcgcgtgctgtggtgcaggcaatatgt
gaattgagacaaaccgggctgcaagtgaagagcctgcaggaatattacggctag
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