Pseudodesulfovibrio thermohalotolerans: LF599_12260
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Entry
LF599_12260 CDS
T09613
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LF599_12260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pthe02000
]
LF599_12260
Transporters [BR:
pthe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LF599_12260
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
TOBE
SbcC_Walker_B
Zeta_toxin
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WFS61438
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Position
2583650..2584702
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AA seq
350 aa
AA seq
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MIRLTDLTINLPGFTLDRVSLHIRPGEFFALMGSTGSGKTLVLETVAGLTRLNGGSVVIG
GRDVTSLPPEERKVSLVYQDHALFPHLTVLQNVMYGQRYHGIKRDDGKREARALLDTLGL
LKLENRRPDNLSGGEKQRTALARALACRPDVVLLDEPLSSLDPQFRGELRRTLKNVHETT
RTTFLMVTHDFADAMILAERGAVIKDGRLHQQDTVANIFRRPATPFTAAFVGMTNVFPAH
YAKGCCTFAGHAFEGLPELPARTAGFAALRPEDAFVGSVKDFPRDWHILRGTVERLEREG
FTWTAVIRCGDQTLTALVDRHMVLSRGLDSGSPVTVGFAGEHLHHMSNNG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcctgaccgacctgaccatcaatctgccggggttcaccctggaccgagtctcc
ctgcatatccggcccggggagttcttcgccctcatgggctccaccggatcgggcaaaacc
ctggtcctcgaaaccgtggcaggcctgacccggttaaacggcggctcggtggtcatcggc
ggacgcgatgtgaccagccttcccccggaggaacgcaaagtcagcctggtgtaccaggac
cacgccctgtttccgcacctgaccgtgctgcaaaacgtcatgtatgggcagcgctaccac
ggcataaaacgggatgatgggaaacgcgaagcccgagcactgctcgacacgctgggcctc
ttgaaactcgaaaaccggcggcccgacaatctctcgggcggcgaaaagcaacgcacggcc
ctggctcgcgccctggcttgccgcccggatgtggtcctcctggacgaaccgctctcttcc
cttgacccgcaattccggggcgagctgcggcgaaccctgaaaaacgtgcatgaaaccacg
cgcacgacgttcctgatggtcacccacgacttcgccgacgccatgatcctggccgagcgc
ggcgcggtcatcaaggacggcaggctgcaccagcaggacacggtggccaacatcttccga
cgccctgccacgccgttcaccgccgccttcgtcggcatgaccaacgtgtttccggcccac
tatgcaaaggggtgctgcacctttgccgggcacgcctttgaagggctgcccgagctgccc
gcgcgaacggcgggattcgcggccctgcggcccgaagacgcctttgtgggaagcgtgaag
gatttcccacgcgactggcatatcctgcgcgggaccgtggaacggctggaacgggaggga
ttcacctggaccgccgtgatccgctgcggcgaccagaccttgaccgccctggtggatcgc
cacatggtgctcagccgggggctcgacagcggctcgccggtgaccgtcggctttgccggg
gaacacctccaccacatgtcgaacaacggctag
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