Pseudodesulfovibrio thermohalotolerans: LF599_12395
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Entry
LF599_12395 CDS
T09613
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe00061
Fatty acid biosynthesis
pthe00071
Fatty acid degradation
pthe01100
Metabolic pathways
pthe01212
Fatty acid metabolism
pthe02024
Quorum sensing
pthe04146
Peroxisome
Module
pthe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LF599_12395
00071 Fatty acid degradation
LF599_12395
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LF599_12395
09145 Cellular community - prokaryotes
02024 Quorum sensing
LF599_12395
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pthe01004
]
LF599_12395
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pthe04147
]
LF599_12395
Enzymes [BR:
pthe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LF599_12395
Lipid biosynthesis proteins [BR:
pthe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LF599_12395
Exosome [BR:
pthe04147
]
Exosomal proteins
Exosomal proteins of breast milk
LF599_12395
Exosomal proteins of breast cancer cells
LF599_12395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Apolipoprotein
Terpene_syn_C_2
YtxH
AMP-binding_C_2
AMP-binding_C
DUF8026
Motif
Other DBs
NCBI-ProteinID:
WFS61464
LinkDB
All DBs
Position
complement(2609573..2611432)
Genome browser
AA seq
619 aa
AA seq
DB search
MTETTDMTLKDLLSRSVELYADRTALGFVGGEALTYAQFGKSVAELQTVLRGLGIKPEDK
IALIGENMPNWAISYFAATTMGVIAVPILQEFHPSAVQHILRHSEAKMVIASRRYMDKVE
GDNIPDLETVMIMDDFSMEDEEGKRTTYVEALEAAGERIEQFAETAREQLEHLGEAARDK
LPETARERVNRFSDTARETMEKFSDSYKETVDWFSASARRFIDRKTGKPFELTEDHIAAI
LYTSGTTGHSKGVVLTHRNLVQNCIGGVRTIPVLETDRFLSVLPMAHTYECSVGLIIPLH
SGSSVFFLQKPPTPKTLLPAMQTVKPTVMNVVPLIIEKIYKSRIKKKLTGTGVARGLMKI
GLTRRKLSQVAGKKLIDAFGGELRCLCIGGAPLSPEVEQFLTDAKVPYAVGYGMTEASPL
LAGTDPSLQRHRGIGPAIPGVELKIDDPDPETGEGEVLARGPNIMREYYKAPKDTEATFT
EDGWLKTGDLGKFEDGYLYLKGRLKNVILGPSGENIYPEEVESIINANDSVQESLVYDSG
GKLMARIHLNYESLDEQFGVNKMIESEVRAKVQKILEDIRVEVNSKVSSFARLKRVVEQI
EPFEKTPTQKIKRFLYTDQ
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagacaaccgacatgaccttgaaggatttgctgagccgttccgtggagctgtat
gccgaccggaccgcgctcgggtttgtgggcggtgaggccctcacctatgcccagttcggg
aagagcgtggccgagctgcagaccgtgctgcgcgggctcggcatcaagcccgaggacaag
atcgctctcatcggcgagaatatgcccaactgggccatcagttattttgcagcgaccacc
atgggtgtcatcgcggttcccatcctgcaggaattccaccccagcgccgttcagcacatc
cttcgtcactccgaggcgaagatggtcatcgcttccagacgatacatggacaaggtcgag
ggcgacaatatccccgacctcgaaaccgtcatgataatggacgatttttccatggaggac
gaggagggcaagcggaccacctacgtcgaggccctggaggccgccggcgagcgcattgag
cagttcgccgaaacggcccgcgagcagttggagcacctgggcgaagcggcaagggacaag
ctgcccgagaccgcacgggagcgcgtgaaccgattcagcgacacggccagggagaccatg
gagaagttctcggactcctacaaggagaccgttgactggttcagcgcctcggcccgccgg
ttcatcgacaggaaaaccggcaagccctttgaactgaccgaagaccatattgccgcgatt
ctctatacctccggcaccaccggccattccaaaggcgtggtcctgacccaccgcaatctc
gtgcagaactgcatcggcggagtcagaaccattccggtcctcgaaaccgaccgttttctg
tccgtgctgcccatggcccacacctacgagtgcagcgtgggcctcattatccctcttcat
tccggcagttcggtctttttcctgcaaaagccgccgaccccgaaaacgctcctgcccgcc
atgcagacggtcaagcccacggtgatgaacgtggtcccgctcatcatcgagaaaatctac
aagagccggatcaagaagaagctgaccggaaccggcgtcgctcgcggtctgatgaagatc
ggcctgacccggcgcaaactttcccaggtggccggaaagaagctcatcgacgcctttggc
ggcgagcttcgctgcctgtgcatcggcggggcacctctttcgcccgaggtcgagcagttt
ctgaccgacgccaaggttccttatgccgtgggttacggcatgaccgaggcgtcgcccctg
ctggccggaaccgatccgtccctgcaacggcatcgcggcatcggaccggcaatccccggc
gttgagctcaagatcgacgatcccgatcccgagacgggcgagggcgaggtcctggcccgg
gggccgaacatcatgcgcgagtattacaaggcccccaaggacaccgaggcgaccttcacc
gaggacggctggctcaagaccggcgatctcggcaagtttgaggacggctatctctatctc
aaagggcggctgaagaacgtcattctcggccccagcggcgagaatatttatcccgaagag
gtcgagtccatcatcaacgccaacgactcagtccaggagtctctggtttacgattccggc
ggcaagctgatggcccgtattcacctcaactacgaaagcctggacgagcagttcggcgtc
aacaagatgatcgaatccgaggttcgcgccaaggtgcagaaaatcctcgaagacattcgc
gtcgaggtgaattccaaggtatcgtcctttgccaggctcaaacgcgtggtcgagcagatc
gagcccttcgagaagacgcccacccagaagatcaagcggttcctttacactgaccaatag
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