Pseudodesulfovibrio thermohalotolerans: LF599_13790
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Entry
LF599_13790 CDS
T09613
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LF599_13790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pthe03000
]
LF599_13790
Transcription factors [BR:
pthe03000
]
Prokaryotic type
Helix-turn-helix
Other families
LF599_13790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
GAF_3
AAA
AAA_16
AAA_2
Mg_chelatase
AAA_22
nSTAND3
AAA_7
MCM
AAA_19
RsgA_GTPase
AAA_3
AAA_6
ABC_tran
NACHT
DLIC
Motif
Other DBs
NCBI-ProteinID:
WFS61736
LinkDB
All DBs
Position
2940297..2941880
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AA seq
527 aa
AA seq
DB search
MHVSVHGLKLSALQTICQVIDQTIELQTALDGVLKILSEQLAMQRATVTLFDPETGQLSI
NASYGLTAEEKRRGVYRLDEGVTGRIFQTGEPYYVPDIDNEPLFLDKTGSRRVKRGMISF
IGVPILLHGDPIGVLNVDRLFEDEVDFEEDVDFLKVVATLISQFLSLNEKIMAREAALKR
ENTSLKYQISKNTKGPYIVGQSSAMVEVQRQMEKVSPTRATVLLLGESGVGKTLIARIIH
ELSERKGNPFIKVNCASIPCNLLESELFGHEKGAFTGATSTRPGRFEEADTGTIFLDEIG
ELPMELQAKLLRVLQDKELERLGSNRTRTVDVRILAATNRDLGHLVERGRFRLDLYYRLN
VFPIRVPALRERKEDITGLLNHFLRKMADNYGRSIHLTSTALDALIRYDWPGNVREMQNL
IERLVIMSEEDRISLEFLKSYLTPAQAAVVREAIPVSEDVPRHTSLREFERNEVMAALER
NGWVQYKAAEALGLSARQMGYRVKKYGLESMIAEGRAKLRRIKESQT
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgagcgtccacggattgaaactgtcggccctgcagaccatctgccaggtcatc
gaccagaccatcgaactgcagacggcgttggacggtgttttgaaaatcctgtccgaacag
ttggccatgcagcgggcgacagtcaccctcttcgaccccgagacgggtcagttgtccatc
aacgcctcctacggtctgaccgccgaggagaaacgtcgcggcgtgtaccgcctggacgag
ggcgtcaccgggcgcattttccagaccggcgaaccgtattacgttccggacatcgacaac
gagccgctcttcctggacaagaccggatcgcgccgggtcaagcgcggcatgatctccttc
atcggggtaccgatcctcctgcacggcgaccccatcggcgtgctcaacgtggaccgtctc
ttcgaggacgaggtcgacttcgaagaggatgtcgacttcctcaaggtcgtggccacgctc
atcagccagttcctcagcctgaacgagaagatcatggcccgcgaggccgccctgaaacgg
gagaacacctccctcaagtaccagatttccaagaacaccaaggggccgtacatagtgggc
cagagctcggccatggtcgaggtgcagcgccagatggagaaggtctcccccaccagggcc
acagtgctgctgcttggcgaatccggcgtgggcaagacgctcatcgcccgcatcatccac
gagctgtctgaacgcaagggcaacccgttcatcaaggtcaattgcgcctcgatcccgtgc
aacctcctggaatcagaacttttcggccacgagaaaggggccttcacaggagccacgtcc
acccggccgggccggttcgaggaggcggacaccgggaccatcttcctggacgagatcggc
gaactgcccatggaactccaggccaagctcctgcgcgtgctccaggacaaggagctggag
cggctcggctccaacaggacccgcaccgtggatgtgcgcatcctcgccgccaccaaccgg
gacctcggccacctggtggagcgcggccggttccgcctggacctctactaccggctgaac
gtcttccccatccgcgtgcccgcgctcagggagcgcaaggaggacatcaccggcctgctc
aaccatttcctgcgcaagatggccgacaactacggacggagcatccacctgacctccacg
gccctggacgcgctgatccgctacgactggcccggcaacgtgcgcgagatgcagaacctc
atcgaacggctggtcatcatgtccgaagaggaccgtatcagcctggaatttctcaagtcc
tacctcacgccggcccaggcggccgtcgtacgggaggccatccccgtctccgaggacgtt
ccgcgccacacctcgctcagggagttcgagcgcaacgaggtcatggccgccctggagcgc
aacggatgggtccagtacaaggcggccgaggccctcggcctgtccgcccgccagatgggc
taccgggtcaagaaatacgggctcgaatccatgatcgccgagggcagggccaagctcagg
cgcatcaaggagagccagacataa
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