Pseudodesulfovibrio thermohalotolerans: LF599_15205
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Entry
LF599_15205 CDS
T09613
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe00260
Glycine, serine and threonine metabolism
pthe00460
Cyanoamino acid metabolism
pthe00630
Glyoxylate and dicarboxylate metabolism
pthe00670
One carbon pool by folate
pthe00680
Methane metabolism
pthe01100
Metabolic pathways
pthe01110
Biosynthesis of secondary metabolites
pthe01120
Microbial metabolism in diverse environments
pthe01200
Carbon metabolism
pthe01230
Biosynthesis of amino acids
pthe01240
Biosynthesis of cofactors
pthe04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LF599_15205
09102 Energy metabolism
00680 Methane metabolism
LF599_15205
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LF599_15205
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LF599_15205
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LF599_15205
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LF599_15205
Enzymes [BR:
pthe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LF599_15205
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WFS61997
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Position
complement(3240891..3242129)
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AA seq
412 aa
AA seq
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MEELFIQDPAIASAIADEIDRQVSKLELIASENFVSTAVRQAQGSVMTHKYAEGYPGKRW
YGGCEFVDEVEDLARERAKELFGATYANVQPHSGSQANMAVYFAACKPGDTVLGMDLSHG
GHLTHGSPVNFSGKLFNMVHYGVDKETQTIDYDAVEALAKEHRPAMIIAGASAYPRIIDF
ARFRAIADEVGAKLMVDMAHIAGLIAAGEHPSCIEYAHYTTTTTHKTLRGPRGGMILSTD
DLEQELNSNIFPGIQGGPLMHVIAAKAVAFGEALSPGFVEYQQQVVRNAKQLAAALTEAG
YKLVSGGTDNHMMLLDLSDKDYTGKDAQIALDKAGITANKNTIPFETKSPFQTSGVRLGT
PALTTRGMIEEDMIVVGEAIVAALENMNDDKALGEIAKEVEEFAREFPLFAW
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggaagagctgtttatccaagacccggcgattgcctccgccattgccgacgagattgac
cgtcaggtctccaagctggaactcatcgccagcgaaaactttgtctccaccgccgtccgc
caggctcaggggtctgtcatgacccacaagtacgccgaaggctacccgggcaagcggtgg
tacggcggctgcgagttcgtggacgaagtcgaggatctggcccgcgagcgcgccaaggag
ctgttcggcgcgacctatgccaacgtccagccgcactccggctcccaggccaacatggcc
gtctacttcgccgcctgcaagcccggcgacaccgtcctcggcatggacctgtcccacggc
ggccacctgacccacggttccccggtcaacttctcgggcaagctcttcaacatggttcat
tacggtgtggacaaggagacccagaccatcgactacgacgcggtggaggctcttgccaag
gaacaccggcccgccatgattatcgccggtgcgtccgcctacccgcgcatcatcgatttc
gcccgcttccgcgccatcgccgatgaagtcggcgccaagctgatggtcgacatggcccac
atcgcgggcctcatcgctgccggtgagcatccgtcctgcatcgaatacgctcactacacc
accaccacgacccacaagaccctgcgcggacctcgcggcggcatgatcctcagcaccgac
gatctggagcaggagctcaactccaacatcttccccggcatccagggcggcccgctgatg
catgttatcgcggccaaggccgtggccttcggcgaggccctgtctcccggtttcgtcgag
taccagcagcaggtcgtccgcaacgccaagcagttggccgccgctctgaccgaggccggc
tacaagctcgtttccggcggcaccgacaaccacatgatgctccttgacctgtccgacaag
gactacaccggcaaggacgcccagatcgctctggacaaggctggcatcaccgccaacaag
aacaccatcccgttcgagaccaagtctcccttccagacctccggcgttcgtctgggcacc
ccggccctgaccacccgaggcatgatcgaagaggacatgatcgtggtcggcgaagctatt
gttgccgctctcgaaaacatgaacgacgacaaggccctgggcgaaatcgccaaggaagtc
gaggagttcgcccgcgaattcccgctcttcgcctggtag
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