KEGG   Pseudodesulfovibrio thermohalotolerans: LF599_15480
Entry
LF599_15480       CDS       T09613                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
pthe  Pseudodesulfovibrio thermohalotolerans
Pathway
pthe00061  Fatty acid biosynthesis
pthe00071  Fatty acid degradation
pthe01100  Metabolic pathways
pthe01212  Fatty acid metabolism
pthe02024  Quorum sensing
pthe04146  Peroxisome
Module
pthe_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:pthe00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    LF599_15480
   00071 Fatty acid degradation
    LF599_15480
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    LF599_15480
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LF599_15480
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:pthe01004]
    LF599_15480
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pthe04147]
    LF599_15480
Enzymes [BR:pthe01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     LF599_15480
Lipid biosynthesis proteins [BR:pthe01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   LF599_15480
Exosome [BR:pthe04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   LF599_15480
  Exosomal proteins of breast cancer cells
   LF599_15480
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: WFS62049
LinkDB
Position
complement(3293485..3295398)
AA seq 637 aa
MAKPYMTTLPRLLVRQAGDRPSKTALREKAWGVWQAVTWEESLRITAEFACGLEALGLGK
GDIVILIGDNRPEWIWAELAIQGLGGMALGLYQDSPAEEIEYVFALSQCRLVVAEDQEQV
DKMLSFRRRLPELRNIVYHEPKGLQAYEAKVEGLASFDAVRRMGRVKGGDCLARFRELAR
KVKPDDPCLVATTSGTTGRPKLAVLSHKNLLSMAHNLGLHDPKTASDEFVSFLPLAWMGE
QMMAVASALLFGFCVNFPETPATASADSREIGPHFIFSPPRVYESIAAKVAGDIMETTPL
KRYLYNRFLPVGYEYVDTVFAGETPSPWLRFKYFLADQGLFRALRDRLGLSRIRSATTGG
AALGPDVFRFFHAVGVNLKQIYGQTEIAGISCIHKEGEVDFTSVGAPIPETEVRISDEGE
IQSRSPAVFLGYYRNEEATRETLTPDGWLLSGDAGYFDDNGRLVVIDRLKDVMRLADGTR
FSPQFLENKLKFSPFLRESVVLGDGRGFVAAILCIDMAIVGHWAESRMITYTTYQDLAAK
DEVYALIREEVAKTNADLPEETRIRRFGLLYKELDPDDSELTRTRKVRRGTINERYGTLI
DALYTDACVLSLETEIAYQDGRVRRMCGDIRIEDMEA
NT seq 1914 nt   +upstreamnt  +downstreamnt
atggccaaaccatacatgaccacgctgccccggctgctcgtcaggcaggccggggaccgg
cccagcaagaccgccctgcgcgaaaaggcctggggcgtctggcaggccgtgacctgggag
gaatccctgcgcatcaccgccgagttcgcctgtgggctggaggccttgggcctgggcaag
ggggatatcgtcatcctcatcggcgacaaccggcccgagtggatttgggccgagctggcc
atccaggggctgggcggcatggccctcgggctgtatcaggactccccggccgaggagatc
gagtacgtctttgccctgtcccagtgccgtctggtggttgccgaggaccaggaacaggtg
gacaagatgctctcgtttcgccggaggctgccggagctgaggaatatcgtctaccacgag
cccaaggggctccaggcctacgaggcgaaggtggaggggcttgcgagtttcgatgccgtg
cgccgcatgggtcgggtgaaggggggcgactgcctggcccggttccgggagctggcccgg
aaggtgaagccggacgatccgtgcctcgtcgccaccacctcgggaaccacgggccgtccc
aagctggccgtgctctcccacaagaacctgctgtccatggcccacaaccttggcctgcac
gatcccaagacagcgagcgacgagtttgtctcctttttgcccctggcctggatgggcgag
cagatgatggccgtggcctcggccctgcttttcgggttctgcgtcaacttccccgagacc
ccggccacggcctcggcggactcccgcgagatcggcccgcacttcatcttctccccgccg
cgcgtgtacgagtccatcgcggccaaggtggcgggcgacatcatggagaccactccgctc
aagcggtatctctacaaccgtttcctgcccgtgggctacgagtacgtggacacggtcttc
gcgggcgaaaccccgtcgccgtggcttcggttcaagtattttctggccgaccaggggctc
ttccgcgccctgcgggacaggctgggcctttcgcgcatccgctcggccaccaccggcggc
gcggccctcgggccggacgtcttccgctttttccacgccgttggcgtcaacctcaagcag
atttacggccagaccgagatcgcgggcatttcctgcattcacaaggagggggaggtggac
ttcacctccgtgggcgcgcccattcccgaaaccgaggtgcgcatctcggacgaaggcgag
atccagtcccggtcgcccgccgtctttctgggctactaccggaacgaggaggccacccgc
gagaccctgaccccggacggctggctgctttcgggcgacgcgggctacttcgacgacaac
gggcggctggtggtcatcgaccggctcaaggacgtcatgcgcctcgcagacggcaccagg
ttttcgccccagttcctggagaacaagctcaagttctcgccgtttctgcgcgagtccgtg
gtcctgggcgacgggcgcgggttcgtggccgccatcctgtgcatcgacatggccatcgtg
ggccattgggccgaatcgaggatgattacctacaccacctatcaggacctggccgccaag
gacgaggtctacgcactcattcgggaagaggtggcgaagaccaacgcggatctgcccgag
gagacgcgcattcggcggtttggcctgctctacaaagagcttgacccggacgacagcgag
ctgacccgcacgcggaaggtccgccgcgggaccatcaacgagcggtacggcacgctcatc
gacgcgctctacaccgacgcctgcgtcctcagcctcgaaaccgagatcgcctatcaggac
ggccgggtgaggcggatgtgcggcgatatccgcatcgaagacatggaggcctaa

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