Pseudodesulfovibrio thermohalotolerans: LF599_16110
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Entry
LF599_16110 CDS
T09613
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pthe03400
]
LF599_16110 (radA)
DNA repair and recombination proteins [BR:
pthe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LF599_16110 (radA)
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GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
DnaB_C
AAA_16
AAA_22
RecA
AAA_24
ChlI
nSTAND3
NACHT
AAA
ABC_tran
DUF7129
SLFN-g3_helicase
IstB_IS21
zf-C3HC4_2
TackOD1
Zn_ribbon_6
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
WFS62164
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Position
3438093..3439415
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AA seq
440 aa
AA seq
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MKTKETYRCAACGAQSLRWQGQCPSCKEWNTLEAVTVSRKTSTPVGAAASQNSPRLLEEL
ESEHLGARPTGMPSLDDLLGTGLVPGAAILLGGEPGIGKSTLLLQLAGSQARLGHTAVYL
SGEESLPQLKSRASRLGLLGPGLMAMATNKVEDGLAVLEGPNPPELLIVDSVQTLASPLA
EGIPGSVSQVRAVSSELVEKTKKTGTTLILVGHVTKDGQIAGPKLLEHMVDTVLYLEGDR
KHFSRILRVLKNRFGPSDELVVFTMKEQGLEVVEDPSTFFLGARDPSLSGTAMALAVDGQ
RPFAVEVQALVSKSFLSIPRRTALGFDTNRLNLLLAVLEKRLRLNLSGHDIYAKISGGLA
SKDPGLDLAVVAAVMSSFYDQPLPEASVFWGEIDLNGQVRPVAAHGVRMKQAGRLGHGPI
CHSGTAPTLADLQQKLFGKR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaggaaacctatcgttgcgccgcctgcggcgcgcaatccctccgctggcag
ggccaatgcccgtcgtgcaaggaatggaacaccctcgaagcggtgaccgtatcccgaaag
acgtcgacgccggtgggcgcggccgcatcacagaattcaccccggctcctggaggaattg
gaaagcgaacatctcggagcgaggccgaccggaatgccctccctggacgacctgctcggg
acgggcctggtgccgggcgcggccatcctgctcggcggcgaaccgggcatcggcaaatcc
accctgctgctgcaactggcgggaagccaggcgcgtctgggccacacggccgtctacctg
tcgggcgaggaatccctcccccagctcaagtccagggcgtcccggctggggctgctcggg
ccgggcctcatggccatggccaccaacaaggtggaggacggcctggccgtgctggaaggg
ccgaacccgccggagctgctcatcgtggactcggtgcagaccctggcctcgccgctggcc
gaaggcatccccggctcggtcagccaggtgcgcgcggtgtccagcgagctggtcgaaaag
accaaaaagaccggaaccaccctcatcctggtgggccacgtgaccaaggacggacagatc
gccggtccgaagctccttgagcacatggtggacaccgtcctgtacctggaaggcgaccgc
aagcatttctcgcgcatcctgcgcgtgctcaagaacaggttcggccccagcgacgagctg
gtggtcttcaccatgaaagagcagggcctggaagtggtggaggacccgtccacgtttttc
ctgggcgcgcgcgatccgtccctttccggcaccgccatggcgctggccgtggacggacag
cggccctttgccgtcgaagtgcaggccctggtgtccaagtcgttcctgtccatcccgagg
cgcacggccctcggcttcgacaccaaccggctgaacctgctcctggccgtgctcgaaaag
cggctcaggctcaacctgagcggacacgacatctacgccaagatatccggcgggctcgct
tccaaggaccccggcctggacctggccgtggtggccgcggtcatgtcgtccttctacgac
cagcccctgcccgaagcctcggtcttctggggcgagatcgatctcaacggccaggtgcgc
ccggtggccgcccacggcgtccgcatgaaacaggccggacggctgggccacggcccgatc
tgccattccggaaccgcccccaccctggccgacctgcaacaaaagctcttcggcaaaagg
tag
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