KEGG   Pseudodesulfovibrio thermohalotolerans: LF599_16110
Entry
LF599_16110       CDS       T09613                                 
Symbol
radA
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
pthe  Pseudodesulfovibrio thermohalotolerans
Brite
KEGG Orthology (KO) [BR:pthe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pthe03400]
    LF599_16110 (radA)
DNA repair and recombination proteins [BR:pthe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LF599_16110 (radA)
SSDB
Motif
Pfam: ATPase Zn_ribbon_LapB AAA_25 DnaB_C AAA_16 AAA_22 RecA AAA_24 ChlI nSTAND3 NACHT AAA ABC_tran DUF7129 SLFN-g3_helicase IstB_IS21 zf-C3HC4_2 TackOD1 Zn_ribbon_6 Zn_ribbon_8
Other DBs
NCBI-ProteinID: WFS62164
LinkDB
Position
3438093..3439415
AA seq 440 aa
MKTKETYRCAACGAQSLRWQGQCPSCKEWNTLEAVTVSRKTSTPVGAAASQNSPRLLEEL
ESEHLGARPTGMPSLDDLLGTGLVPGAAILLGGEPGIGKSTLLLQLAGSQARLGHTAVYL
SGEESLPQLKSRASRLGLLGPGLMAMATNKVEDGLAVLEGPNPPELLIVDSVQTLASPLA
EGIPGSVSQVRAVSSELVEKTKKTGTTLILVGHVTKDGQIAGPKLLEHMVDTVLYLEGDR
KHFSRILRVLKNRFGPSDELVVFTMKEQGLEVVEDPSTFFLGARDPSLSGTAMALAVDGQ
RPFAVEVQALVSKSFLSIPRRTALGFDTNRLNLLLAVLEKRLRLNLSGHDIYAKISGGLA
SKDPGLDLAVVAAVMSSFYDQPLPEASVFWGEIDLNGQVRPVAAHGVRMKQAGRLGHGPI
CHSGTAPTLADLQQKLFGKR
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgaaaaccaaggaaacctatcgttgcgccgcctgcggcgcgcaatccctccgctggcag
ggccaatgcccgtcgtgcaaggaatggaacaccctcgaagcggtgaccgtatcccgaaag
acgtcgacgccggtgggcgcggccgcatcacagaattcaccccggctcctggaggaattg
gaaagcgaacatctcggagcgaggccgaccggaatgccctccctggacgacctgctcggg
acgggcctggtgccgggcgcggccatcctgctcggcggcgaaccgggcatcggcaaatcc
accctgctgctgcaactggcgggaagccaggcgcgtctgggccacacggccgtctacctg
tcgggcgaggaatccctcccccagctcaagtccagggcgtcccggctggggctgctcggg
ccgggcctcatggccatggccaccaacaaggtggaggacggcctggccgtgctggaaggg
ccgaacccgccggagctgctcatcgtggactcggtgcagaccctggcctcgccgctggcc
gaaggcatccccggctcggtcagccaggtgcgcgcggtgtccagcgagctggtcgaaaag
accaaaaagaccggaaccaccctcatcctggtgggccacgtgaccaaggacggacagatc
gccggtccgaagctccttgagcacatggtggacaccgtcctgtacctggaaggcgaccgc
aagcatttctcgcgcatcctgcgcgtgctcaagaacaggttcggccccagcgacgagctg
gtggtcttcaccatgaaagagcagggcctggaagtggtggaggacccgtccacgtttttc
ctgggcgcgcgcgatccgtccctttccggcaccgccatggcgctggccgtggacggacag
cggccctttgccgtcgaagtgcaggccctggtgtccaagtcgttcctgtccatcccgagg
cgcacggccctcggcttcgacaccaaccggctgaacctgctcctggccgtgctcgaaaag
cggctcaggctcaacctgagcggacacgacatctacgccaagatatccggcgggctcgct
tccaaggaccccggcctggacctggccgtggtggccgcggtcatgtcgtccttctacgac
cagcccctgcccgaagcctcggtcttctggggcgagatcgatctcaacggccaggtgcgc
ccggtggccgcccacggcgtccgcatgaaacaggccggacggctgggccacggcccgatc
tgccattccggaaccgcccccaccctggccgacctgcaacaaaagctcttcggcaaaagg
tag

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