Pseudodesulfovibrio thermohalotolerans: LF599_16250
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Entry
LF599_16250 CDS
T09613
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe03030
DNA replication
pthe03430
Mismatch repair
pthe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LF599_16250
03430 Mismatch repair
LF599_16250
03440 Homologous recombination
LF599_16250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pthe03032
]
LF599_16250
03400 DNA repair and recombination proteins [BR:
pthe03400
]
LF599_16250
Enzymes [BR:
pthe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LF599_16250
DNA replication proteins [BR:
pthe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LF599_16250
DNA repair and recombination proteins [BR:
pthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LF599_16250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WFS62192
LinkDB
All DBs
Position
complement(3471909..3472445)
Genome browser
AA seq
178 aa
AA seq
DB search
MPTLDDVRFVAIDFETADPKRDSACALGIVVVDRGEIVARDYRLIRPPRAQFNPFCVRVH
GIHWSDVCDEPSFGELWPRLEPFFEGADFIVAHNAAFDKSVLQTCCREAGRTVPVQPFLC
TVQLARKTWELASNKLPSVCEFLGIELNHHNAASDAEACALIAVNGLRQNPDYLCKVL
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccaacattagatgatgtgcgatttgtggccattgatttcgagacggctgaccccaag
cgggattcggcgtgcgccttgggcattgtggtggtggaccggggcgagatcgtggcccgg
gattaccgcttgatccggccgcccagggcccagttcaatccattttgcgtgcgtgtgcac
gggatacattggtctgacgtgtgcgacgagccgagtttcggcgagctttggccgaggctg
gaaccgtttttcgagggtgcggactttatcgttgcgcacaacgcggccttcgacaaatcc
gtgttgcaaacctgctgccgtgaggcgggccggaccgtgccggtgcagcctttcctgtgc
acggtgcagttggcccgcaagacctgggagctggcttcgaacaagcttccgagcgtgtgc
gagttcctgggcattgagctgaatcaccacaacgcggcttcagacgcggaggcgtgcgcg
ctcatcgcggtgaacggcctgcgccagaaccccgattatttgtgcaaggtgctgtga
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