Paenibacillus thiaminolyticus: NDS46_00040
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Entry
NDS46_00040 CDS
T08812
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pthi
Paenibacillus thiaminolyticus
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pthi03032
]
NDS46_00040 (gyrA)
03400 DNA repair and recombination proteins [BR:
pthi03400
]
NDS46_00040 (gyrA)
Enzymes [BR:
pthi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NDS46_00040 (gyrA)
DNA replication proteins [BR:
pthi03032
]
Prokaryotic type
DNA Topoisomerases
NDS46_00040 (gyrA)
DNA repair and recombination proteins [BR:
pthi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NDS46_00040 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
TBCC_N
THOC7
Motif
Other DBs
NCBI-ProteinID:
WCF08386
LinkDB
All DBs
Position
7644..10181
Genome browser
AA seq
845 aa
AA seq
DB search
MAEEKQSQIKDRDIGMEMRESFLDYAMSIIVSRALPDVRDGLKPVHRRILYAMSELGMAP
DKPYKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSLRYMLVDGHGNFGSIDGDFAAA
MRYTEARLSKIAMELLRDINKDTVDFAPNYDGEETEPVVLPARFPNLLVNGVSGIAVGMA
TNIPPHNLTEVIDGIQALIRNPEITPLELMDYIKGPDFPTAGLILGREGIRQAYMTGRGS
VTMRAKATIEEHNGKARILVHELPYQVNKAKLVEKIAELVREKRVEGITDLRDESDRNGM
RIVIELRRDVNPSVVLNNLYKHTALQSNFGINMLALVNQEPRVLNLREMLYYYLEHQVEV
IRRRTEFDLRKAEARAHILEGLRVALDHLDEVIALIRSSRTADIAREGLISRFQLSVEQA
QAILDMRLQRLTGLEREKIEEEYAELMKKIAELKEILASEQLVLNIINDELEEVKQKYGD
ERRTEITIGEDSILDEDLIPQEDVIITITHSGYIKRLPVTTYRSQKRGGRGVVGMDTKDN
DFVEHLFVTNSHHYLMFFTDKGKVYRIKAYEVPDLSRTARGTPIINLIQIEQGESINAVI
PVKEFEADKFLFFATRHGIVKKTPLDDYVNIRKGGLIAINLREDDDLIGVRLTDGEQEII
MGTSNGMSIRFPEKDVRSMGRSATGVKGITLDDDDFVIGMDVVSEDNDVLIVSSKGYGKR
TPMSEYRIQSRGGKGIKTINVTVKNGPVVGLKVVQPEEDLMIITSLGTIIRMSMAGISQM
GRYAQGVKLINIREDDSVATVSRCDKNEEQDEMEDMNEEPGGQENGPDADSAAADTSGGP
DNPSS
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaaaaacaatcgcaaattaaagatcgcgacatcggcatggagatgcgggaa
tcttttctcgattacgcgatgagcatcattgtcagccgtgcgctgccggatgttcgcgac
ggactgaagccggttcaccgccggatattgtatgcgatgtctgaactcggcatggcgccg
gacaagccatataagaagtcggcaagaattgtcggggaagtcatcggtaagtatcaccct
cacggtgattcagcggtctatgagacgatggtgcgcatggcgcaggacttctctctgcgt
tatatgctggtcgacggtcacgggaacttcggttcgatagatggggacttcgcagcagcg
atgcggtatacagaagcgcgtctgtctaagattgcgatggagctgctgcgtgacattaat
aaagatacagttgatttcgccccgaactatgatggggaagagacggagccagtcgtgttg
ccggcgcggttccctaacctgcttgtcaatggggtctcggggattgcggtcggcatggcg
accaacattccgcctcataatttgaccgaggtcattgacggcattcaggcgcttatccgc
aatccggagattacgccgctcgagctgatggattatatcaaggggccggatttcccgaca
gccggactgattctgggccgcgaagggattcgccaagcgtatatgaccgggcgcggttcg
gttacgatgcgggcgaaggcaacgattgaagagcataacggcaaagcccgcattctcgtt
catgagctgccttaccaggtgaataaggcgaagctggtcgagaagattgccgagctggtc
cgcgagaagcgggtcgagggcattacggatctgcgcgacgaatccgatcgcaacggcatg
cggatcgttatcgagctgcgccgggatgtcaatccgagcgtcgtgctgaacaatctgtac
aagcatacggcgctgcagtcgaacttcggcatcaatatgctggcgctcgttaatcaggag
ccgcgcgtattgaacctgcgcgagatgctctactattacctggagcaccaggttgaagtc
attcgccgccgcactgagttcgatctgcggaaggcggaagctcgcgctcatattctggaa
gggttgcgtgtggcgcttgatcacctcgatgaagtgatcgcgctcatccgcagttcccgg
acagccgatatcgcgcgcgaaggcttgatcagccgcttccagctgtccgtcgagcaggct
caggcgattctcgatatgcgcctgcagcgcttgaccggtctggaacgggagaagatcgaa
gaagaatacgccgaactgatgaagaagattgccgaattgaaggaaattttggcaagcgaa
cagctggtgttgaatattattaacgacgaattggaagaagtaaaacaaaaatatggcgac
gagcgccgtacggagattacaatcggcgaagacagcattctcgacgaggatctaatcccg
caagaggatgttatcatcacgattacgcacagcggctacatcaagcgcctgccggttacg
acgtaccgcagccagaagcgcggcggacggggcgtggtcggaatggatacgaaggataac
gacttcgtcgagcatctgttcgtcaccaattcccaccattacttgatgttcttcaccgac
aaaggcaaggtgtaccgcatcaaggcgtatgaggtgcctgacttgagccgcactgcgcgc
gggacgccgattattaacctgattcagatcgagcagggagaatcgatcaacgccgtcatt
ccggtgaaggaattcgaagcggacaagttcttgttcttcgctacccgccacggtatcgtg
aagaagacgccgctggatgattacgtcaatatccgcaagggcgggctgattgccatcaac
ctgagagaagacgatgatcttatcggggttcgcctgacggatggggagcaggagatcatt
atggggacatcgaacgggatgtcgattcgtttcccggaaaaagatgtccgttccatggga
cgctccgctaccggcgtcaaagggattacgctcgacgatgacgacttcgtcatcggtatg
gacgtcgtcagcgaggacaatgatgtccttatcgtctcctccaaaggctacggcaagcgg
acgccaatgagcgagtaccgcatccagagccgcggaggcaaaggaatcaagacgattaac
gtgacggttaaaaacggccctgtcgtcggcttgaaggtcgtccagccggaagaagatcta
atgatcatcacctcgcttggcaccattatccggatgagcatggcaggcatctcacagatg
ggacgctatgcgcaaggggtcaagctcattaacatccgggaggatgacagtgtagcgacc
gtcagccggtgcgacaagaatgaagaacaggatgagatggaagacatgaacgaggagccg
ggaggccaggagaacggacctgacgcggattctgctgcagccgatacatccggcggccca
gacaatccttcatcctaa
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