Paenibacillus thiaminolyticus: NDS46_00140
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Entry
NDS46_00140 CDS
T08812
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
pthi
Paenibacillus thiaminolyticus
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NDS46_00140 (rnmV)
Enzymes [BR:
pthi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
NDS46_00140 (rnmV)
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Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
WCF11003
LinkDB
All DBs
Position
30955..31560
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AA seq
201 aa
AA seq
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MVIREVIVVEGKDDTVAIQRAVDADTIETGGSAVSEMTIRRIALAQERRGVIIFTDPDHA
GERIRKMIAERVPGCKHAFLARHEAIAKGDLGVENASPEAIRAALGQVRTEMPSAEAELV
WADLVEAGLTIQIGAAERRNRLGEILGIGYCNAKQLLKRCRIFQISREEFEAALVKLDEL
EASAHIVTGTEGERQNEQAFD
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
attgtgattcgagaagtgatcgtcgtggaagggaaagatgataccgtagccattcagcgg
gccgtggacgccgatacaatcgagacgggaggctcggccgtcagcgagatgacgatacgg
cgcattgccttggcccaggagcgccggggcgtaattatatttaccgatccggatcatgca
ggggaacgcattcgaaagatgatcgcggagcgggtgcctggctgcaagcacgccttcctg
gcgcggcatgaggcgatagccaagggtgacctcggcgtggagaacgcatcgccggaggcg
attcgtgcggcgctgggccaagtcaggaccgagatgccgtcggccgaagcggagctggtc
tgggcggatctggtggaagcgggtctgacgatccagatcggcgcggctgaacgccggaac
cgtctgggggagattctcggcatcggatattgcaatgcgaagcaactgctgaagcgatgc
cgcatattccagatcagccgagaggagttcgaggctgcgctggtcaagctggacgagctg
gaggcttctgcacatatcgtaacaggtacggaaggagaacgacagaatgaacaagccttc
gattga
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