Paenibacillus thiaminolyticus: NDS46_01780
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Entry
NDS46_01780 CDS
T08812
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pthi
Paenibacillus thiaminolyticus
Pathway
pthi03420
Nucleotide excision repair
pthi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NDS46_01780
03430 Mismatch repair
NDS46_01780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pthi03400
]
NDS46_01780
Enzymes [BR:
pthi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NDS46_01780
DNA repair and recombination proteins [BR:
pthi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NDS46_01780
MMR (mismatch excision repair)
Other MMR factors
NDS46_01780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
WCF11032
LinkDB
All DBs
Position
361396..363627
Genome browser
AA seq
743 aa
AA seq
DB search
MQEKEGFLASKRREGIVLNTVQTEAVLHTDGPMLLLASPGSGKTTTIVMKIGYLIVEKKA
DPSRIKAITFSRASAADMRERFARLCPELPVRRVDFSTIHSLAFAVTREHLRNARTDFQI
IEGDVDLGSREEAPMGMPALHKKLILRELYKSIAGEHIADDQMDELTTYISFVKNKLLPS
DHWERVPCSVPKAAHIARQYEQFKRTGTDKLLLDYDDMLTVAYKAFSRDRKLLQRYQSRY
DYILTDESQDTSLVQHEIIGKLAQPHRNLCVVADDDQSIYTWRAAEPDYLLQFKQVYPDA
KLLKMEQNYRSSRNIVEVANRFIMQNKQRYDKQMFTANPPQRPIALTEVAEYEDQAKKVA
ERVSAIANLRDTAVLYRNNSSSIALMNEFDRAGIPFFIRDGDSRFFSHWVVEDVLNFMRM
AFTDRRPDLLEKIHLKFNGYISKQQMAALKDIHNGESVFDNLLRHVPLQDYQISLLQDSK
ETFAELKEMTPQAAIRVIRTKLGYDKAVEKTCERLGFRKEYIVGILNTLDNIADGLATLP
DFAARLKRLEAIMASAKRNRDANAVTFSTLHSAKGLEFEHVFMIDLVEGIIPSQEDIRSY
DKGETAEMEEAVRLFYVGMTRAKSQLELLSYRERGGEKARRSRFVSYVEKLQPAPAASSA
QAATVSVPQAGAASIIPNAVRTWSGMGAGTKVKHSTFGPGEIISLDKEAVEIQFAGGRKR
LSASTCLSRGLLALEEEAVPPRG
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagaaggaagggttcttggcaagcaagcggcgggagggcatcgttctcaatacg
gtacagacagaggcggtccttcataccgacgggccaatgctgctgctggcctctcccgga
tcggggaagacgacgacaatcgtgatgaagatcgggtacctgatcgtggaaaaaaaggcg
gatccgtcacgcattaaggcgatcaccttcagcagagcgtctgcggcagacatgagggaa
cggttcgcgcggctctgtcctgagctgccggtccgcagggtcgatttctcgacgattcac
agtctggcgttcgcggtcacccgcgagcatctccggaatgcgcgcactgatttccagatc
atcgaaggggatgtcgatctggggagccgggaagaagccccgatgggaatgccggctctt
cacaaaaagctcatcctgcgcgagctatacaagtcgattgcaggagaacatatcgccgat
gatcagatggatgaattaacgacctatatcagctttgtcaaaaataaattgcttccttcg
gatcattgggagcgcgtcccttgcagcgtgccgaaggcggcgcatatcgcccggcagtac
gagcaattcaagcgaacgggaacggacaagcttctgcttgattacgacgatatgctgacg
gtagcctataaggcgttcagccgtgaccggaagctgctgcagcggtaccagtcccgctat
gattatattttgaccgatgagagccaggatacgtcgctcgtgcagcatgagattatcggc
aagctggcccagccgcaccggaatctgtgcgttgtggctgacgatgatcagagcatttat
acgtggcgggctgcggagccggattatttgcttcaattcaagcaagtataccctgatgcg
aagctgctgaaaatggagcagaattaccgctcttcccgtaatatcgtcgaagtcgccaac
cgattcatcatgcagaacaagcagcgctatgacaagcagatgttcacggccaacccgccg
cagcggccgattgccctcacggaggtcgccgaatacgaggatcaggccaaaaaagtcgcg
gagcgcgtgtccgccatagccaatttgcgcgatacggctgtcctgtaccggaacaattct
tcttcgattgcactgatgaacgagttcgatcgcgccggcatcccgttttttatccgtgac
ggggacagccgatttttctcgcattgggtggtcgaggatgtgctgaacttcatgcggatg
gcgtttaccgaccggcggcctgatcttttggaaaaaatccatctcaagttcaatggctac
atctcgaagcagcaaatggcggcattgaaggacattcacaacggcgaatcggtcttcgat
aatctgcttcgccatgtgccgctgcaggactaccagatcagtctgctgcaggacagcaag
gagaccttcgccgagctgaaggagatgaccccgcaagcggctatccgcgttatccgcacg
aagctgggctatgacaaggccgtcgagaaaacatgcgagcggctcggcttccgcaaagag
tatatcgtcggcatattgaacacgctggacaatatcgccgatggcctcgccacactgcca
gacttcgcggcacgcttgaagcggctggaggcaatcatggcctccgccaagcggaaccgg
gacgctaacgcggtcacgttctctacgcttcacagcgcgaagggtctggagttcgagcat
gtgttcatgatcgacctggtggaaggcatcattccttcgcaggaggacatccgcagctac
gacaaaggcgagaccgcggagatggaggaagcggtccggctattctatgtgggcatgacg
cgggcaaaatcccagcttgaactgctgtcctaccgggagcggggcggggagaaggcgagg
cgttcccggttcgtgtcttatgtggagaagcttcagcctgcgcctgcggcgagctcggcg
caggcggcgactgtgtccgtaccgcaggcaggagcggcttctatcatcccgaatgcggtt
cggacatggagcgggatgggggccggaacgaaggtgaagcattccaccttcggcccgggc
gagattatcagcctggacaaagaggctgtcgagattcaattcgcgggcgggcggaagcgg
ctgtccgcttccacttgcttgagccgcggactattggcgttggaggaagaagctgtccct
ccgcgcggataa
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