Paenibacillus thiaminolyticus: NDS46_02010
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Entry
NDS46_02010 CDS
T08812
Symbol
sinI
Name
(GenBank) DNA-binding anti-repressor SinI
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
pthi
Paenibacillus thiaminolyticus
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pthi03000
]
NDS46_02010 (sinI)
Transcription factors [BR:
pthi03000
]
Prokaryotic type
Helix-turn-helix
XRE family
NDS46_02010 (sinI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SinI
HTH_3
HTH_31
HTH_19
HTH_26
HTH_25
HTH_37
HTH_35
Phage_CI_repr
6PGD
DUF3785
Sigma70_r4
GH-E
Motif
Other DBs
NCBI-ProteinID:
WCF08719
LinkDB
All DBs
Position
complement(417190..417525)
Genome browser
AA seq
111 aa
AA seq
DB search
MIGERIQILRRKKNYSLSELSERAGVAKSYLSSIERGIQQNPSIQFLEKISVILGVSVEE
LLQDKEASNEAEVLDEEWTNLVKEAMASGVSKEQFKEFLEYNKWKLTREES
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgatcggagaacggattcaaatccttcgaaggaagaaaaattactcactgtcagaactc
tccgaaagagcaggtgtcgcaaaatcctatttaagctcaattgaaagaggaattcagcag
aatccttccattcagtttctggagaagattagtgttattctgggggtctcagttgaggag
ctgctgcaagacaaggaagcttcgaatgaagctgaggtgttggacgaagaatggaccaat
ctcgtaaaagaagcgatggcttctggcgtaagtaaagagcaattcaaagaatttctggaa
tataataagtggaagctaacacgcgaagagtcatga
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