Paenibacillus thiaminolyticus: NDS46_04850
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Entry
NDS46_04850 CDS
T08812
Name
(GenBank) contractile injection system protein, VgrG/Pvc8 family
Organism
pthi
Paenibacillus thiaminolyticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
AHH
DUF6531
Phage_GPD
CatAgl_D1
HNH_2
DUF4337
Motif
Other DBs
NCBI-ProteinID:
WCF09235
LinkDB
All DBs
Position
1061132..1068868
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AA seq
2578 aa
AA seq
DB search
MRIRYGGVILELPVELQRLTGLVLTREVNEHIRLQFSAIIPEEKKDSYIHELGYGSPIIV
YRELEDSDEPDSGSRQGEVLFHGPIRRLDIQCVRGVYTLQAEACSYTWAMDIERKRRSFQ
RVDMSYADVIEQVLQDYPHANMQDHATNHARIGGLIMQYDETDWQFIKRLASHFGAVVVP
DAASGSARFSLGVSADREPVEVSDAQYVIRNDFRRSLLARTNENPELQETDFISFEIDTP
LWLPLGGRVSFARRPFVIRAAASAVRDGLLRHTYTFCTADGIRQGYRSNPRIQGLSLDGT
ITDISRNRIRVQLAIDSAQAKGDTCWFPYSTGIDNQISYLMPKPGSGVKLHFPTVNEREA
IAIGSVRKGGEASKYGHKQSDPKVRSLTNDTGKEMKLTGQDVVFSANDEGSIKVRVSGDG
TVEIAADTDLYLSAATAVALGASESAAAEAAAAVPKRISISAGEDVFISRSPGEYVDPAH
VIAIQDSTYVQGAKIIYLGEPGEPPAETFDDSAQLAEDAKLMEEVNAQALAYREACIAKA
EAAKSKFGFGAIALVVGVVAVAVATVATGGAALPLIVGAAGTVSAIVGASEIAEGREDFA
KAQVGDLSQSYNFMRDTVLGGDEELYNIVKYGSVTISVLGGGFLAGGTTLLAGGVTGGTM
SAGITAIFDPYQPLDGTFSWKAMAGHYLKSFYNGALAGTLSAGVLKGVPCGAGPLTQFGG
RYSASFVASSVLDISNSGDVNFLNNAVSSVFGAAFSFMGGKSRIGRYGASVTGDMAGGSA
IQLLQNGTIDKDTFFDQLKKSLVSNVGNLVTRLDPIDVAKGRFYLQATDLVVHDIGDTLE
LTRSFNSQNPFVGMLGKGWLSSLESSLTRVEDRAFLICMDGHYESFILQEGEWRNERSGA
LDYRLVEEPRRGRYVVKHQRYTYVYDGSTGRLVSFSDGNGNRTELEYDEEGLRSLTTPGG
KELAFTWRNGKLAAITDNIGRMVEYRYAGDLLAGVTYPNKGEVTYAYDSEGRLTSITDQN
GHTYVRNEYDSADRVIRQYDGEGHVADIVYDERARMTTFTFHATGVVETYKYNRDYLVTE
AHYDDGTQEAYTYDAWQNKDSHTAANGTVTRWVYDAYGHLLEEVRPDGTKVEHQYDEDGN
RIRTATAGGSETRYAYDTRGNLLEERVRIDDTNESVTAYEYDEFGRLIRRIDPMGQATTF
RHEVKHTDAPTFVQDAEGQQFKYGYDAAARMTSITTSYGTVEIAYNVLNQRTRIIDAAGN
TTVLFYDPMGNLIKKVLPNEYVERLGNGIGTEYRYDFMDRLIRTTDPMQNEQRVMYDIHD
NLVKAVHPNEYSRTEDDGAGVEYEYDHRNRRIRSLFPDGSIARTKYDAVGNIIKTIDPER
YNPETDDGPGTEYVYDAMNRLVQITDPEGHVIKRFLYDEEGRVVKMIDARGWLSGETDEE
RFGTLYAYNRAGWLIEKREPVEAEGGTILYKLTLYRHDQAGRLVEERRTAEHVGATGYAS
RYHRIRYRHDKLGRVILIEDDTGAEIRYTYDCLNQVTSERRKLSEQKEQVTRYEYNAVGL
LERKIDLIDAEDLAEGRSLSGSEDKIAAVTSYRYDRNGNMIKLVSPEGYETEISYDRADR
IIQISRRERQDSKARSVYFKYDRAGNVLEETDTNGHRVAYSYDLMNRLIRTTGKRGETTR
LFYDRTGQIIKRVSPNQYNPLTDDGDGTIYRYDALNRLIEVRDACGQIVEQNRYNQAGEL
IRKLSEGIGVEYTYTIGGRVKQIRTAEAAARGKVSQEYTYDALGNITGVVDGEGNRTRHS
LDAWGNIRVLTRADGSEERYSYDRAGNIISSTDANGHTTLYRYNSLGKLAAVEDPSQQHI
EYQYDRQGRLTRQVDRNERVIEYAYNFDDQLVKRREAAGGAEEIYVYNEDGTLRTAGNDR
MRYDYTYTPDGRLAAKYISEPPLGIRRKGDWAGSPPFADPLTSPGANGAAAPQSWHRMDA
LEPEAAGAGMRKLLEFRYDPDGEVTGLTDAAGRHTEYRYDKIGRIQEVLQGRERLAQYRY
GEGNRIASILYGSGISVEYGYDRDGQMTSLRAAGQDGRDLMRHTYSYDNNGNQIAKMEHH
QLTLYSYDRLNRLQEVDYGSGAQESYSYDPAGNRIRRLLDGQATSYAYDSRNRLLSLLED
DGGRTEFEYDRQGNLLFERSGNGTTSYAYDAFNRTAQVEMPDGSYVRHEYDPEGLRSGIC
ENGVTSRFVFDGWNMLNELDEEWNAKASYVRGHELLAQVDGQGDAYYYLNNQHGDVVHIT
NRLGGIVNSYEYDAFGHTLSATEGIPNRFRYAGEQFDPVTQQYYLRARFYNPVIARFTQE
DEYRGDGLNLYAYVGNNPIRYVDPSGYSCEEKGNVYGKGDRKEGPYGGADNSSRLIPGTP
GKVTGGSSTKLGKNMFKEMGQSRSTKRTPYQAQHIIPFELSEHPVIQKIGMDMDHTSNGI
FLRVPDEYVGATSRHQGYHSVYSEFVELRLNKMDINQDINVLDKQVFELQQKLRKLQEKG
LPLYKTDIYLQKELKKLKSKGLDQYILDRANNKDKIKPVWDRGGGATLDLWERWFEKL
NT seq
7737 nt
NT seq
+upstream
nt +downstream
nt
atgaggattcgttacgggggagtaatcctcgaactcccggttgagcttcaacgcctgacc
gggcttgtcttaacgagagaggtcaatgaacatatccggcttcagttcagcgccatcatc
ccggaagagaagaaggacagttatattcatgaactcgggtacggatcgccgattatcgtc
taccgggagctggaggacagcgatgaaccggacagcgggagccggcaaggggaagtgttg
ttccacggcccgatccgccggctggatatccagtgtgtacgcggtgtgtatacgctgcag
gccgaagcctgttcctatacgtgggcgatggacatcgagcgcaagcggcgctcgttccag
cgggtcgatatgagctatgccgatgtgattgagcaggtgctgcaggactatccgcatgcc
aatatgcaagatcatgcgacgaatcacgcccggattggcgggctgattatgcagtatgat
gagaccgattggcagttcatcaagcggctggcttcgcatttcggcgctgtcgtggtgccg
gatgcggcctcgggaagcgctcgcttctcgctcggcgtatctgcggatcgggaaccggtg
gaggttagcgatgcgcaatatgtcatccggaacgacttccgccgcagtctgctggcgcgg
accaacgagaatccggagctgcaggagaccgacttcatcagcttcgagatcgacacgccg
ctctggcttccgttagggggacgcgtcagcttcgcccggaggccgttcgttatccgcgcc
gccgcatcagccgtgcgggacggccttctgcgccacacgtatacattctgcaccgccgat
ggaatcagacaaggctatcggtccaatccgcggattcaaggcttgtcgctggacgggacg
attacggacatctcgcgcaaccgcattcgggtgcagctggccatcgattccgcccaggcg
aagggcgatacatgctggttcccttattcgacggggatagacaaccagatctcgtacctg
atgccgaagccgggctcgggcgtcaagctgcatttcccgacggtgaatgagagagaagcc
attgcgatcggctcggtcaggaagggaggcgaggcgagcaagtacgggcataagcagtcc
gacccgaaggtgcgatccttaacgaatgatacgggcaaggaaatgaagctgaccggacag
gatgtcgtcttcagcgccaatgacgagggcagcatcaaggtgcgtgtgtccggagacggc
accgtggagatcgctgcggacactgatctgtacctcagcgccgcaactgctgtggcgctt
ggggccagcgagagcgctgcggcggaagcggctgcggccgtgccgaagcgaatctcgatc
tcggcgggggaagatgtattcatcagccggagtccgggggaatacgtcgatccggcgcat
gtgatcgcgatccaggattcgacttatgtccaaggagccaagattatctatctgggcgag
cccggcgaaccgcctgccgagaccttcgacgacagcgcccagctggccgaggatgccaag
ctgatggaagaggtcaacgctcaggcgctagcctatcgcgaggcgtgcattgccaaggcg
gaggcggcgaagagcaagttcgggttcggcgccatcgccttggtggtcggcgtggtcgcg
gtagcggtcgcgacggttgcgaccggaggcgccgcgctgccgctaatcgtcggcgccgcc
ggcaccgtctcggccatcgtgggcgcgagcgagatcgcggagggccgcgaggatttcgcc
aaggctcaggtgggcgatctgagccaatcctataacttcatgcgggatacggtgctcggc
ggcgacgaggaactgtacaatatcgtcaaatacggctcggtcaccatctccgtgctgggc
gggggcttcttggccgggggcacgactttgttggccggcggtgtgaccggcgggacgatg
agtgcggggataacggcgatatttgatccgtaccagccattggacggcaccttcagttgg
aaagcgatggccgggcattatttgaagagcttctataacggggccttggccggaacgctc
tcggcgggcgtgttgaagggcgttccgtgcggggccggtccgctcacccagttcggcggc
agatatagtgcaagcttcgtggcttcaagcgtgctcgatatcagcaattccggcgatgtg
aatttcctgaacaatgcggtaagcagcgtattcggcgcggcgttctccttcatgggagga
aaaagccggatcggccgctacggcgcgtccgtcaccggggacatggctggaggttccgcg
atccagcttctgcagaacgggaccatcgacaaggatacttttttcgaccagttgaaaaag
tccctcgtaagcaatgtcggaaatctggtgacgaggttagacccgattgatgtcgccaaa
ggccggttctatctgcaagcgactgatctggtcgtgcatgatatcggtgatacgctggag
ctgacgcgcagctttaattcgcagaacccgttcgtgggcatgctgggcaaaggctggctt
agttcgctggagagctcgctgacccgggtagaggatcgcgccttccttatctgtatggat
ggccattatgagagcttcatcctccaggagggcgaatggcgcaatgaacggtcgggagcg
ctcgattaccggttagtcgaggagccgcgccgagggagatatgtcgtcaagcatcaacga
tacacgtatgtctatgacgggtccaccggacggctggtctcgttcagcgacggcaacggc
aaccgcacggagctggaatatgacgaggaaggcctgcgctcgttgacgacgccaggcggc
aaggagcttgcttttacctggaggaacggcaagctcgccgcgatcacagacaacatcggg
cgcatggtcgaataccggtatgcgggcgatctgctggccggggtcacctacccgaacaag
ggcgaggtcacttacgcctatgatagcgaagggcgtctcacttcgattaccgatcagaat
ggccatacctatgtgcgcaatgagtacgacagcgccgatcgggtcattcgccagtatgac
ggcgagggccatgtcgcggatatcgtctacgacgagcgggccaggatgacgacctttacg
tttcatgccaccggagtcgtggagacgtacaaatacaaccgcgattatttggttacggaa
gcgcactacgatgacggcacgcaggaagcctacacctacgatgcctggcagaacaaggac
agccatacggccgccaacggcaccgtcacgcgctgggtgtacgatgcctatggccatttg
ttggaggaggttcggcctgatggcacgaaggtggagcatcagtacgacgaagacgggaac
cggattcgcacggcgacggccggtggcagcgagactcgttacgcctacgatacccggggg
aatctgctggaggaaagggtgcggatcgacgacacgaacgaatccgtcaccgcttatgag
tatgatgaattcggacggctgatccgccgcatcgatccgatgggccaagcgacaacgttc
cggcatgaggtcaagcatacggatgcgccgaccttcgtacaggatgcggaaggccagcag
ttcaagtatggctatgacgccgcggcccggatgacgagcattacgacctcctacggcacg
gtggagattgcctacaatgtgctgaaccagcggacgcgcatcatcgatgcggccggcaac
acgacggtgctgttctatgatccgatgggcaatttgatcaaaaaagtgctgccgaacgaa
tatgtggagcgcttgggcaacggcatcgggacggaatatcgctacgacttcatggaccgc
ctcattcggacaacggatccgatgcagaacgagcagcgggtcatgtacgatatccatgac
aatctggtgaaggccgtccatccgaacgaatatagccggacggaggatgatggggccgga
gtcgaatatgaatacgatcaccggaaccgccgcatccggagcttgttcccggacggcagc
atcgcccgcacgaagtatgatgctgtcggcaatatcatcaagacgatcgatccggaacgg
tataatcccgagaccgatgacggcccgggcaccgagtatgtctacgatgcgatgaaccgc
ctcgttcagattaccgatccagaggggcatgtcatcaagcgcttcttgtatgacgaggaa
ggcagagtcgtcaaaatgatcgatgcccgcgggtggctaagcggggagaccgatgaagag
cgtttcggtacgctgtatgcctataaccgggccggctggctaatcgagaagcgggagccg
gtcgaagccgagggcgggacgatcctgtacaagctgaccttgtaccggcatgaccaggcg
ggccgtctcgtggaagagcggcggacggcggagcatgtcggggcgaccgggtatgcgagc
cggtatcatcgtatccgctaccggcatgacaagctgggccgggtcatcctgatcgaggat
gatacgggagccgagatccgctacacctatgattgcttgaatcaggttacgtccgagcgg
cgcaagctgagcgagcagaaggaacaagtcacccgctatgagtacaacgcggtcgggctg
ctagaacgcaaaatcgatctgatcgatgcggaagatctggcggagggccgctcgttgagc
ggaagcgaggataagatcgccgccgtgacctcctatcgctatgaccggaacggcaatatg
atcaagctggtctcgccggaaggctatgagaccgagatcagctacgatcgggccgatcgc
atcattcagattagccgccgggaacgccaggacagcaaggcgcggagtgtctacttcaag
tatgaccgggcgggcaatgtgctggaggagacggatacgaacggccaccgcgtggcctat
agctatgatctgatgaatcgcctcatccgcacgacaggcaagcggggcgagacgacgcgc
ctgttctatgatcggacgggacagatcatcaagcgggtgtcgccgaaccagtataatccg
cttacggatgacggcgacggcactatataccgttatgatgcgttgaaccggctgatcgag
gttcgcgatgcctgcggtcagatcgtggagcagaaccgttataatcaggcgggcgagttg
atccgaaagctgagcgaaggcattggcgtggaatatacgtataccatcggcggccgggtg
aagcagattcgcaccgcggaggctgcagcccgcggcaaggtaagccaggagtacacgtac
gacgcgcttggcaatattacgggcgtcgtggacggcgaagggaataggacgcgccacagc
ctggacgcatggggcaacatccgggtgctcactcgtgcggatggaagcgaggagcggtac
agctacgaccgtgcaggaaatatcattagctccacggacgccaacggacatacgaccttg
taccgttacaacagtctgggcaagctggcggcggtggaggatccgtcgcagcagcatatt
gagtaccaatacgaccgccagggccggctgacgcggcaggtcgatcgcaacgagcgcgtt
atcgagtatgcgtacaacttcgacgaccaactggtgaagcgaagagaagccgcaggaggc
gcggaagaaatctacgtctacaacgaggatggcacgctgcgaacggccggcaatgatcgg
atgcggtatgactatacgtatacgccggacggcagattggcggcgaagtatataagcgaa
ccgccgcttggaattcgccgcaagggcgattgggccggatcgcctccgttcgcggacccg
ttgacaagtcccggagcgaatggagcggccgctccccagtcttggcatcggatggatgcg
cttgagccggaggctgcgggtgcgggtatgcgtaaactgctcgagttccgctatgacccg
gacggagaggtaaccgggttgaccgacgccgcaggcagacatacggaataccgctatgat
aaaataggccgtatccaggaagtgctgcagggccgggaacgtctagcgcagtaccgctat
ggcgaaggcaaccgcatcgcctccattctgtacggaagcgggatcagcgtcgaatacggc
tatgaccgggacggccagatgacgagtctgcgggcggccggccaagacggccgggacctg
atgcgccatacgtacagctacgacaataacggcaaccagattgccaagatggagcatcat
cagcttaccttatacagctatgaccgcttgaaccgcttgcaggaagtcgattacggcagc
ggcgcccaggagtcgtacagctacgacccggccgggaaccgcatccgccgcttgctggac
ggacaggccacaagctatgcctacgacagccgcaaccgtctgctgtcgctgcttgaggac
gacggcggccgtaccgaattcgagtacgaccgccagggcaatttgctcttcgaacgttct
ggcaacggcaccacttcttatgcttatgacgcgttcaaccggaccgcgcaggtcgagatg
ccggacggcagctatgtccgccacgaatacgacccggaagggctgcgcagcggcatatgc
gagaacggcgtgaccagccgcttcgtgttcgacggctggaatatgctgaacgagctggac
gaggagtggaacgcgaaggcctcctatgtgcgcggccatgaattgctggcgcaagtggac
ggccaaggagatgcctactactacctgaacaaccagcacggcgacgtcgtgcacatcacg
aaccggctgggcggcatcgtcaacagctacgagtacgacgccttcggccataccttgtcc
gccaccgaaggcatcccgaaccgcttccgctatgcgggcgagcagttcgaccccgtcacg
cagcaatattacctgcgcgcgcggttctacaacccggtcattgcccggttcacccaggag
gacgagtaccgcggcgacggcttgaacctgtacgcgtatgtggggaacaatccgattcgg
tatgtggacccgagcgggtattcgtgtgaggaaaaagggaatgtttatggtaagggtgat
aggaaggaagggccttatggaggggccgataatagttctagattaattcctggaacacct
ggaaaagtaacaggcggaagttccacgaagcttggtaagaatatgtttaaggagatggga
cagtcccgctcaactaagcgaactccatatcaggcacagcacattattccttttgaactt
agtgagcaccctgtaattcaaaaaataggaatggatatggaccatacttccaatggtatt
ttccttcgtgttccagacgaatatgttggggctacttctaggcatcagggataccactcc
gtttatagtgaatttgtcgaacttagactaaataaaatggatataaatcaagatattaat
gtacttgataaacaagtctttgaattgcaacaaaagttaaggaagcttcaagaaaagggt
ttacctctatacaagacagatatttacctccaaaaggaattaaagaagctaaaatcaaaa
ggactagatcagtatattcttgacagagctaacaataaagataaaattaagcctgtttgg
gatagaggcgggggagcaactcttgatttgtgggaaaggtggtttgagaagttatga
DBGET
integrated database retrieval system
