KEGG   Paenibacillus thiaminolyticus: NDS46_04985
Entry
NDS46_04985       CDS       T08812                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pthi  Paenibacillus thiaminolyticus
Pathway
pthi00010  Glycolysis / Gluconeogenesis
pthi00020  Citrate cycle (TCA cycle)
pthi00260  Glycine, serine and threonine metabolism
pthi00280  Valine, leucine and isoleucine degradation
pthi00310  Lysine degradation
pthi00380  Tryptophan metabolism
pthi00620  Pyruvate metabolism
pthi00630  Glyoxylate and dicarboxylate metabolism
pthi00640  Propanoate metabolism
pthi00670  One carbon pool by folate
pthi00785  Lipoic acid metabolism
pthi01100  Metabolic pathways
pthi01110  Biosynthesis of secondary metabolites
pthi01120  Microbial metabolism in diverse environments
pthi01200  Carbon metabolism
pthi01210  2-Oxocarboxylic acid metabolism
pthi01240  Biosynthesis of cofactors
Module
pthi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pthi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pthi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pthi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pthi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NDS46_04985 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NDS46_04985 (lpdA)
   00620 Pyruvate metabolism
    NDS46_04985 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NDS46_04985 (lpdA)
   00640 Propanoate metabolism
    NDS46_04985 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NDS46_04985 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NDS46_04985 (lpdA)
   00310 Lysine degradation
    NDS46_04985 (lpdA)
   00380 Tryptophan metabolism
    NDS46_04985 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NDS46_04985 (lpdA)
   00670 One carbon pool by folate
    NDS46_04985 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pthi04147]
    NDS46_04985 (lpdA)
Enzymes [BR:pthi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NDS46_04985 (lpdA)
Exosome [BR:pthi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NDS46_04985 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO FAD_binding_3 FAD_oxidored HI0933_like GIDA FAD_binding_2 NAD_binding_8 Lys_Orn_oxgnase UDPG_MGDP_dh_N 3HCDH_N Trp_halogenase Thi4 AlaDh_PNT_C Lycopene_cycl ApbA Amino_oxidase SAM_MT
Other DBs
NCBI-ProteinID: WCF09257
LinkDB
Position
1090266..1091708
AA seq 480 aa
MVVGEIAVETEVVVIGGGPGGYSAAIRLGQLGQSVVLVEKEELGGVCLHSGCIPSKALIH
AAGLYDDAKSASKLGLRLDPGALAFDMSVWQQWKSGIVGKLRSGVAQLCAANGVTVVKGS
AVFLSADRVGVETESGFETYKFRQAIIASGSRPHLPPFAAVGGPRILTSAEALESETLPE
RLAIIGSGYIGIELGMAFAKLGCRVTLIEREERILPLVDGSLAAEVKRRASKLGMVIKTG
TEVRAVAEHDDHVELRLESRRHGEESILCDKVLVTTGRMPNTEGLGLSQAGVQVDERGYV
PVDAECRTNVRHIFAIGDITPGPALAHRAAKQGTVAAEVIGGLPSAFDSPYVPYVIFSDP
QIAGVGLTRAEAERQGMKVKTGRFPFRANGYALAAGKTDGFAEVVVEADSHLLLGMHAAG
ADAGSLIGQGALALELAARAEDVAMTVHPHPTISEGWLEAAAAALGHAIHIVNERRLEDE
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggttgtcggcgagattgcagtagaaacggaagttgttgttattggcggcggtccgggc
gggtattcggcggccattcgcctgggccagttggggcaatcggttgttctggtggaaaaa
gaagagctgggcggcgtctgtcttcattcgggctgcattccgtccaaagcgttgattcat
gcggccggcctgtatgacgatgccaagtcggcctccaagctggggctgcggctcgacccg
ggggcgcttgccttcgatatgtccgtatggcagcagtggaagtccggcatcgtcggcaag
ctgcgaagcggcgtggcacagctctgcgccgccaacggggttacggtcgtgaagggaagc
gccgtcttcctgtccgccgaccgcgtcggggtggagacggaatccggcttcgagacctat
aagttccggcaggcgattatcgcgtcgggatcacggccgcatctcccgccattcgcagca
gttggcggtccacgtatcctcacttcggcggaggcgctggagtcggagactctgccggag
cgtctggccattatcgggagcggctacatcggcatcgaattgggcatggccttcgccaag
cttggatgccgcgtgacgcttatcgagcgggaggagcgtatcctcccgcttgtagacggc
agcctcgccgcggaagtgaagcggcgcgccagcaagctggggatggttatcaagacgggg
acggaagtgcgcgcggtggctgagcatgacgatcatgtcgagctgcgcctcgaatcgcgg
cggcatggagaggagagcatcctctgcgacaaggtgctggtgacgaccgggcgcatgccg
aacacggagggactcggtcttagtcaggcgggggtgcaggtggatgagcgcggctatgtt
ccggtcgatgcggagtgccggacgaatgtgcgccacatcttcgccattggggatattacg
ccagggcccgctcttgcccaccgggccgcgaagcagggcacggtcgccgcagaggttatc
ggcggactgccaagcgccttcgattcgccctatgtgccgtatgtcattttctccgatccg
cagattgcgggcgtggggctgacgcgggcggaagccgagcggcagggcatgaaggtgaag
acgggccgcttcccgttccgggccaacggatacgcgctggcggccgggaagacagacggc
ttcgcggaagtggtcgtcgaagcggactcccacttgctgctgggcatgcacgcggccggc
gcggatgccggcagcttaatcggccaaggcgcgctcgccctcgaattggcggcgagagcg
gaagatgtggccatgacggtccatccgcacccgacgatcagcgaaggctggctggaggcg
gcagccgccgccttggggcatgccatacacattgtgaatgagaggaggctggaagatgag
taa

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