Paenibacillus thiaminolyticus: NDS46_06950
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Entry
NDS46_06950 CDS
T08812
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pthi
Paenibacillus thiaminolyticus
Pathway
pthi00020
Citrate cycle (TCA cycle)
pthi00190
Oxidative phosphorylation
pthi00650
Butanoate metabolism
pthi00720
Other carbon fixation pathways
pthi01100
Metabolic pathways
pthi01110
Biosynthesis of secondary metabolites
pthi01120
Microbial metabolism in diverse environments
pthi01200
Carbon metabolism
Module
pthi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pthi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pthi_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NDS46_06950 (sdhA)
00650 Butanoate metabolism
NDS46_06950 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NDS46_06950 (sdhA)
00720 Other carbon fixation pathways
NDS46_06950 (sdhA)
Enzymes [BR:
pthi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NDS46_06950 (sdhA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
AlaDh_PNT_C
NAD_binding_8
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
WCF09605
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Position
1503727..1505493
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AA seq
588 aa
AA seq
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MAKQKIIVVGGGLAGLMAVVKAAEAGVHVDLFSLVPVKRSHSVCAQGGINGAVNTKGEGD
SPWEHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLMDRMGVMFSRTPEGLLDFRRFGGTQ
YHRTAFAGATTGQQLLYALDEQVRRWEAAGLVTKYEHWEFLSAVIDEDEVCRGVTAQDLR
SMEVKSFAADAVILATGGPGIIFGKTTNSVINTGTAASAVYQQGVRYANGEFIQIHPTAI
PGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFHVCVDLK
LGVNGENMVYLDLSHKDPKELDVKLGGIIEIYEKFMGDDPRKIPMKIFPAVHYSMGGMWV
DYNQMTNIKGLFAAGECEYQYHGANRLGANSLLSAIFGGMVAGPKAVEYIRGLDKTVEDI
SSSVFDREVKLRADRYDNLLKMDGSENAYVLHKELGEWMTNNMTVVRYNSKLEETVVKIK
ELKQRYANINMSDTARWNNQAASFTRQLWNMLELAEAMTKSALLRNESRGAHYKPDFPER
NDEDFLKTTIADWTPEGPEISYDEVDVSLIQPRKRDYTMDKKSKKKGE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcagaaaatcatcgtcgtcggcggcggtctcgccggtctgatggctgtcgta
aaagcagcggaggcaggcgtgcacgttgacctgttctctctggttcccgtcaagcggtcc
cactccgtatgcgctcagggcggaatcaacggggcggtcaacacgaagggggaaggcgac
tcgccatgggagcattttgacgatacggtatacggcggggacttcctcgcgaaccagcct
ccggttaaggcaatgtgcgaagcggcgccgggcatcatccatttgatggaccggatgggc
gtcatgttcagccgcacgccggaagggctgcttgatttccgccgcttcggcggcacgcag
tatcaccggacagcgttcgccggagcaacgaccggccagcagctgttgtatgcgcttgac
gagcaggtgcgccgttgggaagccgctggtctcgtcaccaagtatgagcattgggaattc
ctgtcggccgttatcgacgaggatgaagtgtgccgcggcgtcactgcgcaggatctccgc
tcgatggaggtcaagtcgttcgcggccgatgcggtcattctcgcgaccggcggtcccggc
attattttcggcaagacgacgaactcggttatcaataccggcacggcagccagcgctgtc
taccagcagggggtccgctatgcgaacggggaattcatccagattcacccgacggccatt
ccgggagatgacaagctgcgtctcatgtccgagtccgcgcgcggcgaaggcggacggatc
tggacctacaaggacggcaagccatggtatttcctcgaggaaaagtatccggcatacggg
aacctcgtgccgcgtgatatcgcgactcgggaaattttccatgtctgcgtcgatttgaag
ctcggcgtcaacggcgagaacatggtctacctcgatctgtcgcacaaggatccgaaggag
cttgacgtcaagctcggcggtattatcgagatttacgagaagttcatgggggacgacccg
cgcaagattccgatgaagatcttcccggctgttcactattcgatgggcggcatgtgggtc
gactacaatcagatgacgaatatcaagggcctgttcgccgcaggggaatgcgaataccag
tatcacggggcgaaccgtctcggcgccaattccctcctgtcggccattttcggcggcatg
gtcgcggggccgaaggccgtggaatatattcgcgggctggataagaccgttgaggatatc
tcctccagcgtattcgaccgcgaagtcaagctgagagcggatcggtacgataatctgctc
aagatggacggcagcgagaatgcctatgttctccataaagagctgggcgaatggatgacg
aacaatatgacggtcgtccgctacaattcgaagctggaagagaccgtcgtgaagattaaa
gagctgaagcagcgttatgcgaatatcaatatgtcggatacggcacgttggaacaaccag
gccgccagcttcacccgccagctgtggaacatgctcgagctggccgaagcgatgacgaag
agcgccctgcttcgcaacgagagccgcggcgctcattacaagccggacttcccggagcgg
aacgacgaggacttcctcaagacgacgattgccgattggacgccggaagggccggagatc
agctacgacgaggtagacgtatcactcattcaaccgcggaagcgcgattatacgatggat
aaaaaaagtaaaaagaaaggagaataa
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