Paenibacillus thiaminolyticus: NDS46_07140
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Entry
NDS46_07140 CDS
T08812
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
pthi
Paenibacillus thiaminolyticus
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pthi03000
]
NDS46_07140
Transcription factors [BR:
pthi03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
NDS46_07140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_DeoR
Sigma70_r4
HTH_5
HTH_IclR
MarR_2
HTH_24
HrcA_DNA-bdg
GntR
HTH_PafC
Sigma70_r4_2
HTH_AsnC-type
HTH_10
HTH_23
GerE
HTH_20
HTH_36
Fe_dep_repress
HTH_Crp_2
LexA_DNA_bind
TrmB
HTH_7
DUF2089
MarR
HTH_Mga
HTH_22
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WCF11098
LinkDB
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Position
1555050..1555763
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AA seq
237 aa
AA seq
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MEAVELQYNVGNEAVHEHEFCRRKKGGCAIQLTPRQSEIVQLVQRSAPITGEQIAEQLGI
SRPTIRSDLSVLVMLGYLDAKPKVGYFPGNITAGAPSEPLNIRVQDVQSMPIIVRDTSTV
HDAVVTLFLENVGSLIVADDEGMLLGVVSRKDLLKVTLGNAVAGTMPVSFVMTRTPLITV
KPEDSIIEAAKRLDEHDIDTLPVVVQRGDAANDKWEVVGRISKTTILKVFLRQAKGR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgtcgaattgcagtacaatgtagggaacgaagctgtgcatgaacatgaattt
tgtcgaaggaaaaaggggggatgcgccattcaacttacgccgcgccaatcagaaatcgtc
cagctcgtgcaacggtccgctccgattaccggcgagcagatcgcagagcagctcgggatc
agccggccgacgattcgttcagatctttccgtgcttgtcatgctgggatatttggatgcc
aagccgaaggtcggttatttcccgggaaacattacggcaggcgctccaagcgagccattg
aacattcgagtacaggacgtccagagcatgcccatcatcgtccgggacacttccactgtt
catgatgctgtagtcacgttgtttttggagaacgtaggaagtttgattgtagctgatgac
gaggggatgctgcttggggtcgtctcaagaaaagatttgttgaaggtaacgctcggcaat
gcggtggcggggacgatgcccgtcagcttcgtgatgacgcgcacgccgctgattaccgtg
aagccggaggattcgataatcgaggccgccaaaaggctggacgagcatgatatcgatacg
ctgcctgtcgttgtacagcgtggagatgcggccaacgacaaatgggaggtcgttggacgg
atatccaagacgacgattctgaaagtatttcttcgccaggcgaagggcaggtaa
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