Paenibacillus thiaminolyticus: NDS46_08595
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Entry
NDS46_08595 CDS
T08812
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pthi
Paenibacillus thiaminolyticus
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pthi03019
]
NDS46_08595
Messenger RNA biogenesis [BR:
pthi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NDS46_08595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
TTRAP
Motif
Other DBs
NCBI-ProteinID:
WCF09895
LinkDB
All DBs
Position
1870980..1871936
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AA seq
318 aa
AA seq
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MTLIKQLTNQDDFIGFYLLKELEVKQTNGNPPKDYLDIVLCDATGQLPAKYWDASPTDKE
TFFPMGLVKVRGIVQTYRERLQVKILQIRPAKEEDGVTLTDFIRSAPIRPIDLIHAIKQA
ISSISDKEIRALVSFCVAKVEEKLMHYPAAKTHHHAYFAGLAYHMVRMLEIGDFLCRQRP
FLNPDLLKAGIILHDIAKPEEMVAQLGIVSEYSVQGKLVGHISMASNWITEAALRLDIDL
DSPKVLGLQHLVLSHHNLGEWGSPVQPQTPEAVALHHIDALDAKLQMVEDALDTTPETEA
WTPFIRGLENKAIYRMKL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgacattaatcaagcaactgacgaatcaggacgactttatcggcttttatttgctgaag
gagctggaggtcaagcagacgaacggcaatccgccgaaggactatttggacatcgtcctg
tgcgatgcgaccgggcagcttccagcaaaatattgggatgcatccccgaccgataaggag
acatttttcccgatggggctcgtgaaggtgcgcggcatcgtgcagacctaccgggaacgg
ctgcaggtgaaaattctgcaaatccgtccggccaaggaggaggacggggtgacattgacc
gatttcattcgttcggccccgattcgtcccatcgacctgattcatgcaatcaaacaggcc
atctccagcatttccgataaggagattcgcgcgcttgtctccttctgcgtagcgaaggtg
gaggagaagctgatgcactacccggcggcgaaaactcatcaccatgcctatttcgcaggc
ttggcctaccatatggtgcgcatgctggaaatcggggattttctgtgccggcagcggccg
ttcctgaacccggatctgctgaaggcgggcatcattcttcatgatattgcgaagccggag
gaaatggtggcccaactcggcatcgtatcggaatatagcgttcaaggcaagctggtcggc
catatttcgatggcatcgaactggattacggaggcggccctgcgcctcgacatcgacctt
gattcgccgaaggtgctcggcctgcagcatctcgtgctgtcgcatcataatctgggcgaa
tggggcagccccgtgcagccgcagacgccggaggcggtggcgctccatcatatcgacgcg
ctggacgcgaagctccagatggtcgaggatgcgctggacacgacgccggagacggaggcg
tggacgccgttcatccgcggcttggagaataaggcgatctatcggatgaagctgtag
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