Paenibacillus thiaminolyticus: NDS46_09145
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Entry
NDS46_09145 CDS
T08812
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pthi
Paenibacillus thiaminolyticus
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pthi03400
]
NDS46_09145 (addA)
Enzymes [BR:
pthi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NDS46_09145 (addA)
DNA repair and recombination proteins [BR:
pthi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NDS46_09145 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_16
AAA_22
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
WCF09996
LinkDB
All DBs
Position
2040875..2045284
Genome browser
AA seq
1469 aa
AA seq
DB search
MDKSRDERDNRREYESGSEAGGSSRLPSASAAGGTASLPPAAAARQDGEARVLAAETASG
GEGRVLTAEAMSGGEAPVELPPRPAESTWTEEQWQAIVDGGENILVAAAAGSGKTAVLVE
RIIRRISDESAMLHVDQLLVATFTKAAAAEMRERIRLALERKLEANPDSEHLRRQLALLN
RASITTLHSFCLEVIQRHFQAVQLDPAFRVANETEIELLRQDVLEELFEERYASKDPAFA
RMVDWFSGERNDEAAFRLVHRLYDFSRSHPWPEEWLDSMTASFSPADIEELGRSPWADSI
MAAARLTLNGIVELLRQAIALTTAPGGPEPYRAALEQEVAGAAALADAASSVPWERMHES
FGLLSFGRLAACRGDQYDKELQEQVKRLRDQAKKRLQQVRDELFRRKPEQFLQELHAIRP
VLEALTSVVSEFGARFEAAKRAKGWLDFADLEHYCLRILRDPSSTPERPVPSAAGLLYQE
QFAEILLDEYQDTNMVQEAIVDLITRPGQGNRFMVGDVKQSIYRFRLAEPGLFQSKYTSY
GKKGQGDGIRIDLARNFRSRQGIVDTVNMVFRQIMNADVAELTYDSAAELVCGASYPSAD
EIAAESRRDRDEFGLPYFATELLLIDKGVPAPADEAAEDEDGETERAAVDAAELETARLE
ARAIASRIRRMTGDEGEPPYLVYDKDQKRMRPVTYRDMVILLRATQAWAPLMMEELRREG
IPAYAEFSTGYFTATEVEIVLSLLRVIDNPQQDIPLAAVLRSPIVGLQEEELARIRLYGK
GKPFYYAVMEAARTEAHDCSPEAMQLELPLSADEGAASASASQQGWEGWQAKLRRFLDRL
EQWRNAARQGRLSELIWQVYRETGYYEWVGGLAGGLQRQANLRALYDRARQYESSSIRGL
FRFLRFIDRMRDSGGDLGTARALGEREDVVRIMTIHKSKGLEFPVVIVAGLSKRFNQQDL
NASFLMHKHLGFGPKYVDEEKRVAYPTLPNLAIRRQMRLELLAEEQRVLYVALTRPKEKL
ILIGTVQDAEKSIRKWGEALDVERLLLPDYVVAEARSYLDWIGPAIIRHPAAAEWRRYAG
LPNRNGESLLDDLSRWQLAMVPASVIAADERLAEMPVDEERKLRLKALRRLETEEVFPRS
IWAEQIGERLSWRDPHRIVTLLPSKTSVTEMKRLAASDDWPPEDWVGAPAGPEEEVGTAA
ELRGLEAAEAAIGGNEPAAAAGAAADGDQAASGPYSDPSRTLYLRRPKFMERRGITPVER
GTAYHLLMQHLPLNRPLTAAEVNHTLDDLVARLIMTRMQADALDAESVAAFFDSEVGRQL
AEASWVKRELPFSYGLTATEAYTIEGLRRRESVTAAAEALGSGTASASGNEPRFVATPAF
AAMDSSGQLDQETVLVQGIIDCLFEWNGELVLLDYKTDKVLAHRGGLPGLTEHYRFQLEL
YARAIEEIWKRPVKRKVLYFFDAKQACEL
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagccgcgatgaacgggataaccgccgcgaatacgagagcggcagcgaggcc
ggcgggagttcccgcttgccgtcagcctctgccgctggcggaactgcgagcttgccgcca
gccgctgcggccaggcaggatggcgaagcgcgcgtcctggcagccgaaacggcgtcgggg
ggcgaagggcgcgtcttgacagccgaagcgatgtccgggggcgaagcgcctgtggagctg
ccgccgagaccggctgagagtacgtggaccgaggagcagtggcaggcgatcgtcgacggc
ggcgagaacattttggttgcggccgcagccggctccgggaagaccgcggtattggtcgag
cgcatcatccgccgcatcagtgacgagtcggcgatgctgcatgtcgatcagctgctcgtc
gctaccttcacgaaggcggccgcagccgagatgcgcgagcggatccgcctggcgctggag
cgcaagcttgaggcgaatccggattcggagcatttgcgccgccagctcgcgctgctgaac
cgcgcctcgattacgacgctgcactccttctgtctggaggttatccagcgtcatttccag
gcggtccagctggatccggccttccgggtcgcgaacgagaccgagatcgagctgctgcgc
caggacgtgctggaggagctttttgaagagcgctatgccagcaaggatccggcctttgcg
cggatggtcgattggttcagcggagagcgcaatgacgaagccgcctttcggctcgtccac
cggctgtatgatttctcccgcagccatccgtggccggaggaatggctggacagcatgacg
gcttcgttcagcccggcggacatcgaagaactgggccgctccccatgggcggacagcatt
atggcggcggcgcggctgacgctgaacggcatcgtcgagctgctgcgccaggcaatcgcg
ctgacgacggctccgggcggtccggagccgtaccgcgccgcgctggagcaggaggtggcc
ggagcggccgcgttggcggatgcggcctcgtccgtcccgtgggagcggatgcatgagtcg
ttcgggctgctgagcttcggacggctggcggcctgccgcggggatcaatacgacaaagag
ctgcaggagcaagtgaagcgtctgcgcgatcaggcgaagaagcgcctgcagcaggtgcgc
gacgagctgttccgccggaagccggagcagttcctgcaggagctgcatgcgatccggccg
gtgctcgaagcgctgacttcggtcgtcagcgaattcggtgcccggttcgaggcggccaag
cgggcgaagggatggcttgattttgccgatttggagcattactgcctgcgcattttgcgc
gatccttcctccacgccggaacggccggtgccgtccgcagcggggttgctgtatcaggag
caatttgccgagatattgctcgatgagtatcaagatacgaatatggttcaggaagcgatc
gtggacttgattacccggcccggtcagggcaaccggttcatggtaggggacgtgaagcag
agcatctaccgcttccgtctggcggagccgggattgttccagagtaagtatacctcctat
gggaagaaaggccagggggatggcatccgcatcgatctggcccgcaatttccgcagccgc
caaggtatcgtcgatacggtcaacatggtgttccgccagattatgaacgcggacgtggcg
gagctgacctatgactccgcggcagagctcgtatgcggggcgtcctacccgtccgccgat
gagatcgcggcagagagccgccgcgatcgggacgagttcggtctgccgtatttcgcaacc
gagctgctgctgattgacaagggcgtgcccgccccggcagacgaggcggcggaggatgag
gacggcgagacggaacgggcggcggtggatgccgcagagctggagaccgcgcgcctggaa
gcgagggcgatcgcttcgcgtatccgacgcatgacgggagacgaaggggagcccccttat
ctcgtgtacgataaggatcagaagcggatgcgcccggtcacgtaccgggatatggttatt
ctgctgcgggcgacccaagcctgggcgccgctgatgatggaggagctgagacgggaaggg
attccggcttatgccgagttcagcaccggttattttacggctacggaagtggagatcgtc
ttgtctctgctgcgcgtcatcgacaatccgcagcaggatattccgctcgctgcggtcctg
cgttctcctatcgtcggcttgcaggaggaagagctggcccggattcggctgtacgggaag
ggcaagccgttctattacgcggttatggaagcggcgcggacggaagcgcacgactgctct
ccggaggcgatgcagctggagcttcctctgtcagcggatgagggcgcggcctctgcctcg
gcctctcagcaaggctgggaaggctggcaagcgaagctgaggcgcttcctcgaccggctg
gagcagtggcggaatgccgcacggcaagggcggctgtccgaattgatctggcaagtgtac
cgggagaccgggtactacgagtgggtcggagggctggctggcggcctgcagcgccaggcg
aacctgcgcgccctgtatgatcgcgcccggcaatatgaatcgtcttcaatccggggactg
ttccgcttcctgcggttcatcgaccggatgcgcgatagcggcggggaccttgggacggcc
cgtgcgctcggggagcgggaggacgtcgtccgcattatgacgattcacaagagcaaaggg
ctcgaattcccggtcgtcatcgtcgcggggctgtcgaagcggttcaatcagcaggatctg
aacgcgtccttcctgatgcacaagcatctcggcttcggcccgaagtacgtcgatgaggag
aagcgggtcgcttaccccacgctgccgaatctggccattcgccgtcagatgaggctggag
ctgctggccgaggagcagcgcgtgctctacgtcgcgctcacgcggccgaaggagaagctg
attctgatcggcacggtgcaggacgcggagaagtcgattcgcaaatggggagaagcgctt
gatgtcgagcggctgttgctgccggattatgtggtggcggaagcccgatcgtatctcgac
tggatcgggccggcgatcatccggcacccggccgcggccgagtggcgccggtatgccggc
ctgccgaaccggaacggggaatccctgctggatgatctgtcccggtggcagctcgcgatg
gtgccggcatccgtcattgcggcggacgagcgtctggcggagatgccggtagatgaagag
cggaagctccgattgaaggcgctgcgccggctggagacggaggaggtgttcccccgctcc
atatgggcggagcagatcggggagcggctgtcctggcgcgatccgcaccgcatcgtgacg
ctgttgccgtcgaagacatcggtgacggagatgaagcggctggccgcttccgatgattgg
ccgccggaggactgggttggcgctccggccgggccggaagaagaggttgggacggcggcg
gagctccgtggcctagaggccgcggaggcggcaataggcggcaatgaaccggccgctgcg
gcgggagcggctgcagacggcgatcaggcggcatccggaccgtattccgacccgtcccgc
accttgtatctgcggcgtccgaagttcatggaacggcgcggcatcacgcctgtcgaacgg
gggacggcctaccatctgctgatgcagcatcttccgctgaatcgcccgctgacggcggcc
gaggtgaatcatactctcgacgatctggtggccaggcttattatgacgcggatgcaggcg
gatgcgctggatgcggagagcgtcgccgctttcttcgacagcgaggtcggcaggcagctg
gccgaagcatcgtgggtgaagcgggagctgccgttcagctatggcttgacggcaacggaa
gcgtacacgatcgagggccttcgccggcgcgaatcggtaacggccgcggccgaagcgctg
ggaagcgggactgcttccgcatcggggaatgagccgcgcttcgtcgcgaccccggccttc
gccgcgatggattcatccgggcagctcgatcaggagaccgtgctcgtgcaagggattatt
gattgcctgttcgaatggaacggcgagctggttctgctcgattacaagacggacaaagtg
ttggcccatcggggcggtctgcccgggctgacggagcattaccgcttccaactggagctg
tatgcgcgggcgattgaagagatatggaagcggccggtgaagcggaaggtgctgtacttc
tttgacgcgaagcaggcttgcgagctgtaa
DBGET
integrated database retrieval system
