Paenibacillus thiaminolyticus: NDS46_09150
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Entry
NDS46_09150 CDS
T08812
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pthi
Paenibacillus thiaminolyticus
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pthi03400
]
NDS46_09150
DNA repair and recombination proteins [BR:
pthi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NDS46_09150
Archaeal homologous recombinant proteins
NDS46_09150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WCF09997
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All DBs
Position
2045606..2046802
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AA seq
398 aa
AA seq
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MRILHTADWHFGRTLEGRSRLEEQAAFVDELVAMTEEERVDLVLIAGDVYDSVNPPAAAE
QLFYEGVARLSDGGRRPIVIISGNHDHPERLSASAPLVEERGVVLIGQPTLDAVVVPCAR
TGEEAVIAALPYPSEARLGELLSDEAEEQAVRRAYSARVSQLLARQAQRFRPTAVNLAMS
HLYVLGGAESDSERPIQVGGAYTVDPSAFACQGAPAVPQYTALGHLHRPQYVKGPGVIRY
SGSPLAYSFSEAGQAKSVTLLDLAPGSEAVPEERYLSSGRPLAEWNARGGYEEVMRWIEE
GRDSRAWLDVSLTLTEALTMEQIQKLRRAHDGIVHIRPVYTEAERETEDEVRLSELPVQE
MFRRFYERQTGGAQPDDALVACFLELIEPEAVEKEESA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattttacataccgcggattggcatttcgggcggacgctggaagggcggagccgt
ctggaggagcaggcggcgttcgtagacgagctggttgcgatgacggaggaggagcgggtc
gatctcgttcttatcgcgggggacgtctacgattcagtcaatcctccggctgccgcggag
cagttgttctatgagggggtggcccgcttgtcagacgggggccgccgcccgatcgtcatt
atttccggcaatcatgaccatccggaacggttatctgcctcggccccgctcgtcgaggag
cggggcgttgtccttatcgggcagccgacgctggatgcggttgttgtgccgtgcgcgcgg
acgggggaggaagcggtcatcgcggccctgccgtacccgtcggaagcgcggctgggcgag
ctgttgtcggatgaggccgaggagcaggcggtgcgtcgggcctacagcgcccgcgtgtcg
caattgctggcgcggcaggcgcagcggttccggcccacggcggtcaatctcgccatgagc
catctgtatgtgctgggcggggcggagtccgactcggagcgcccgattcaggtcgggggc
gcctatacggtcgatccgtccgccttcgcctgccagggtgcgccggccgtgccccaatat
acggcgctggggcatttgcaccggccccagtatgtcaagggaccgggcgtcatccgctac
agcggctccccgctcgcttacagcttctcggaggccgggcaggcgaagtcggtgacgctg
ctcgatctggcccccggttcagaagcggtgcccgaggagcgctatctgtcgtccggccgt
ccgcttgcggaatggaatgcccgcggaggctatgaggaagtgatgcgctggatcgaggaa
gggcgcgacagccgcgcctggctggatgtgagcctgacgctgaccgaggcgctgacgatg
gagcagattcagaagctgcgccgcgctcatgacggcatcgttcatatccggccggtatat
acggaagcggaacgggagacggaggacgaggtgcggctgagcgagctgccggtgcaggag
atgttccgccgcttctatgagcggcagaccggcggcgctcagccggatgatgcacttgtc
gcctgcttcctcgagctgattgaacctgaagccgtagagaaggaggagagcgcatga
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