Paenibacillus thiaminolyticus: NDS46_09460
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Entry
NDS46_09460 CDS
T08812
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pthi
Paenibacillus thiaminolyticus
Pathway
pthi00470
D-Amino acid metabolism
pthi00550
Peptidoglycan biosynthesis
pthi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NDS46_09460 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NDS46_09460 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pthi01011
]
NDS46_09460 (murD)
Enzymes [BR:
pthi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NDS46_09460 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pthi01011
]
Precursor biosynthesis
Amino acid ligase
NDS46_09460 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox_3
FMO-like
Mur_ligase
AdoHcyase_NAD
Motif
Other DBs
NCBI-ProteinID:
WCF10056
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All DBs
Position
2110414..2111841
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AA seq
475 aa
AA seq
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MEHPDMYQGKRVVVLGLAKSGVGVAKTFHERGALVTVNDKKERDKCPEASELEALGICVV
CGHHPDDLLDASVQLVVKNPGIPYSAPPVRQALALGIEVVTEVEVAYHLSSAPIIGITGS
NGKTTTTTWVGNMLEAAGLHPIVAGNIGTPLCQAAGEAGADNVLVAELSSFQLKGTSAFR
PRVASLLNMSETHLDYHGTMEDYVQSKARLFRNMANGDVAVLNADDATCRALAPDIGARI
WWVSSTRRVECGVYVEPPYAEASGGGEEEERQLVYADEAGQLHPIIGVREIGLPGRYNVD
NALAAVAISIAAGAEPAALAEPLRSFRGVEHRLEYVGEVNGASYYNNSKATNTKATLMAL
EAFQAPVVLIAGGLDRGLDFLELVPVLKERATAVVTMGETREILAAIAAKAGLTNVAVVD
NVDNATEAVSEAVRLAAGYAKPGDVVLLSPACASWDMFPSYEERGRMFKAAVHSL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggagcatccagatatgtaccaaggtaagcgcgtcgtcgttctcggcctggccaagagc
ggcgtcggtgtggctaagacgtttcatgaacgcggcgccctcgtcactgtcaatgataag
aaagaacgcgacaaatgccctgaagcttcggagctggaagctttgggcatttgtgttgtg
tgcggccatcacccggacgatctgctggacgccagcgtccaactggtcgtcaaaaatccg
ggcattccgtattcggcgccgcctgtgcgccaggcgcttgcgctcggcattgaggttgtg
accgaggtggaggtcgcttatcatctcagttcggcgccgatcatcggcatcacgggcagc
aacgggaagacgaccacgacgacctgggtcggcaatatgctcgaagcggccggtcttcat
ccgatcgtcgccggcaatatcggcacgccgctctgtcaggctgccggggaagcgggtgcg
gacaacgtgctggtcgcggagctgagcagcttccagctcaaggggacatccgccttccgt
ccgcgtgtcgccagcttgctgaacatgtcggagacccatttggattaccatgggacgatg
gaggattatgtccagtccaaggcccgcttgttccgcaatatggcgaatggagatgtcgcc
gtgctcaatgcggacgacgcgacctgccgtgcgctcgctccggatattggcgcccggatc
tggtgggtgtcgtccacgcggcgcgtcgaatgcggcgtctacgtcgagcccccttacgca
gaagcgtccggtggcggggaggaggaagaacgccaattggtgtatgcggatgaagcgggg
caattgcatccgatcatcggcgtgcgggagatcggcctgcccgggcgatacaatgtggac
aacgccttggcggccgttgccatatcgattgcggcgggcgccgagcctgcggcgctggcg
gagccgctccgatcgttccggggcgtggagcatcgcctcgaatacgtgggcgaggtgaac
ggggcatcgtactataacaactccaaggcgacgaacacgaaggcgacgctgatggcgctg
gaggcgttccaagcgccggtcgtcctgattgccggcggcctggatcgcgggcttgatttc
ctggagctggttccggttctgaaggagcgggccactgctgtcgtcacgatgggcgagacg
agggagattctggcggccatcgccgccaaggcgggtttaacgaacgtggcggtcgtcgac
aatgtagataatgcaacggaagccgtctcggaagcggtgcgtctggcggccggctatgcc
aagccgggagatgtcgtgctgctgtcgccggcttgcgcgagctgggatatgttcccttcc
tatgaagagcgcggacgaatgtttaaggcggcggtgcatagtctttaa
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