Paenibacillus thiaminolyticus: NDS46_10575
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Entry
NDS46_10575 CDS
T08812
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pthi
Paenibacillus thiaminolyticus
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pthi03016
]
NDS46_10575 (thpR)
Enzymes [BR:
pthi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NDS46_10575 (thpR)
Transfer RNA biogenesis [BR:
pthi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NDS46_10575 (thpR)
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
WCF10256
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All DBs
Position
2366767..2367357
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AA seq
196 aa
AA seq
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MMADTESKMRLFIGVPLGESTSAALDNWAKQARRQWTFSRWVHPADYHITLQFLGDTPES
KLAPLLEELNRTAAHSGPFRLVLSEWGTFGLPASPRVLWAAVAGDIDRLHELHHQVLKTT
APLGFLPESRPYRPHITLARKYKGTEAWDPGMLETETGGAAAEWTADRFCLFRTHMQATP
MYERLGEFRLSGTSGS
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggatacagagagcaagatgcggctgtttatcggcgtgccgctgggcgagtct
accagcgccgccctcgacaactgggcgaagcaagcgcggcgccagtggacattttcccgc
tgggttcatccggcggactaccatatcacgctgcaatttctcggtgataccccggagtcg
aagctggccccgctgctggaagagctgaaccggacggcggcgcacagcgggccgttccgg
ctggtcttgagcgaatggggcacgttcgggcttcctgcctcgccgcgggtactgtgggcg
gccgtcgccggagatatcgataggcttcatgaactgcatcatcaggttctgaagacgacg
gctccgctaggcttcctccctgaatcgaggccataccggccccatattacgttggcccgc
aagtataagggaacggaggcatgggacccgggcatgctggagacggagacgggcggcgcg
gcagcggaatggacggcggaccggttctgtctgttccgaacacatatgcaggctacgccg
atgtacgagcggttgggcgagttccggctatccggtacttccggttcataa
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