Paenibacillus thiaminolyticus: NDS46_10940
Help
Entry
NDS46_10940 CDS
T08812
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pthi
Paenibacillus thiaminolyticus
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pthi03016
]
NDS46_10940 (truB)
Enzymes [BR:
pthi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NDS46_10940 (truB)
Transfer RNA biogenesis [BR:
pthi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NDS46_10940 (truB)
Prokaryotic type
NDS46_10940 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF5788
Motif
Other DBs
NCBI-ProteinID:
WCF10324
LinkDB
All DBs
Position
2444827..2445741
Genome browser
AA seq
304 aa
AA seq
DB search
MTELHGVLPVWKPAGWTSHDVVAKVRRLIREKRIGHTGTLDPQVVGVLPLCVGRATRLVE
YLQEMPKEYEATLRLGVSTDTEDMSGEVTERADASHVTEAMVKEALLSFIGPIEQVPPMY
SAVKVNGKRLYELAREGKTVERKPRQVTIHHIELIGMTLGGAEPEVRFRVQCSKGTYIRT
LCVDVGRKLGVPAAMAELIRTRSANFREEDSFTFAQIEEAMAAGTLAELLIPMDRAVSHF
PELRVVPAFAPHAVQGKGIPERGLSVPPLTNCIYRLYDEEGTFFGLYHKPDTEQVLRPIK
VFVP
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcttcatggtgttcttccggtatggaagccggcaggctggacgtcgcatgat
gtagtggccaaagtccgccggctcattcgggaaaagcggatcgggcatacgggcacgctc
gatcctcaagttgtgggggtcttgccgttatgcgtcggcagagcgacacgactggtcgaa
tatttacaggaaatgccgaaggagtatgaagcgacgctgcggctgggcgtgtcgaccgat
acggaggatatgtcaggcgaagtaacggaacgcgccgatgcatcccatgtaaccgaagcg
atggtcaaggaagcgctgctgtcgttcatcgggcccatcgaacaggttcctccgatgtac
tccgcggtcaaggtgaatggcaagcggctgtacgagctggctcgcgagggcaagaccgta
gagcgcaagccgcgtcaagtgacgatccatcacattgagctgatcggaatgacgcttggc
ggcgctgaaccggaggtgcggttccgcgttcaatgctccaagggaacgtacatacgaacc
ctgtgcgtcgatgtcggacgcaagctgggagtcccggcggcaatggcggaattgatacgg
acccgctccgccaacttcagagaagaggatagcttcaccttcgcccagattgaagaagcg
atggcggccggaacgctggcagagctgctgattccgatggatcgcgccgtctcgcatttt
cccgagctgcgggtggttcctgccttcgcgccgcatgcggttcagggcaagggcatcccg
gaacgagggctgagcgttccgcctttgacgaattgcatctatcggttgtatgatgaagaa
ggaacttttttcggcttgtatcataagccggacacggagcaggtgctgcgtccgatcaag
gtcttcgtgccttaa
DBGET
integrated database retrieval system
