Paenibacillus thiaminolyticus: NDS46_11065
Help
Entry
NDS46_11065 CDS
T08812
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pthi
Paenibacillus thiaminolyticus
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pthi03009
]
NDS46_11065 (rimO)
Enzymes [BR:
pthi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NDS46_11065 (rimO)
Ribosome biogenesis [BR:
pthi03009
]
Prokaryotic type
ribosomal protein modification factors
NDS46_11065 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
PDEase_I_N
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WCF10349
LinkDB
All DBs
Position
2471925..2473253
Genome browser
AA seq
442 aa
AA seq
DB search
MTEQIKIVTLGCDKNLVDSEIMSGIMDQYGHELVENAEDATVIIVNTCGFIDAAKEESVN
TILELADLKETARLKALIVSGCLTQRYKEQLLEEMPEIDGIVGTGDFHKINDIVAEALQG
RKPVRVGNPVFNYEQILPRKVATPRYTAYVKIAEGCDNNCTFCSIPIMRGKFRSRSMESI
LAEVKQLAEQGVREISLIAQDSTNYGVDLYDGFKLPELMNKVSEVPGVEWVRLHYAYPGF
FTEELIDMIASNPKICKYVDMPLQHSEDTILKRMRRPGRQRDSRELVRKIRAQIPEVALR
TSIIVGFPGETDEDFENLAAFVREMKFDRLGVFTYSPEEDTAATRLPDHVPDEVKEWRAN
TLMEIQREVSKNVNERHIGRTLDVLVERYDGRNDVYIGRSQYDAPEIDGEVFISNCKLSI
GEIAKVKITHALEFDLAGEGVL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaaatcaaaatcgtaacgctgggctgcgacaaaaacttggtggattccgag
attatgtccggaattatggatcagtacgggcatgaattggtagaaaacgcggaggatgca
accgtcattattgtcaatacttgcgggttcatcgatgcagcgaaggaagaatcggtcaat
acgattttggaactggcagacttgaaggagaccgcccgcttgaaggcgctcatcgtctcc
ggatgtctgacgcagcgatacaaggaacaattgttggaggaaatgccggagatcgatggc
attgtcggcacgggggacttccacaaaattaacgatatcgtcgccgaagcgctccaaggc
aggaagccggtccgcgttggcaatccggtcttcaactatgaacagatcttgccgcgcaaa
gttgcgacgccgcgctacaccgcttatgtcaaaatcgcggagggctgcgataacaattgc
accttctgcagcattccgattatgcgaggcaaattccgcagccgctcgatggaatcgatt
ctggccgaggtgaagcagcttgcggagcaaggagtcagggagatcagcttgatcgctcag
gactctaccaattacggcgtcgatctgtatgatggcttcaagctgccggagctaatgaac
aaagtcagcgaagtgcccggcgttgagtgggttcgtcttcattatgcgtatccgggattt
ttcacggaagagctaatcgacatgatcgcctcgaatccgaagatctgtaaatatgtcgat
atgccgctgcagcatagcgaagacacgattctcaagcggatgcgccggccgggccgccag
cgcgattcccgcgagctggttcgcaaaatccgggcgcagattccggaagtggccctccgc
acctcgattatcgttggttttccgggcgagacggatgaagatttcgaaaatttggctgcc
ttcgtgcgtgagatgaagttcgatcgtcttggcgtcttcacttattcgccggaagaagac
acggcggcgacgcggctcccggatcatgtgccggacgaagtaaaggaatggcgcgcgaat
acactgatggagattcagcgcgaagtatcgaagaatgtgaacgagcgtcatatcggccgc
accctggatgtgctggttgagcgttatgacggccgcaacgacgtatatatcggacgttcg
cagtatgatgcaccggagattgacggtgaagtgttcatctcgaactgcaaattaagcatc
ggggagatcgccaaagtcaaaatcacgcacgcactcgaatttgatttggccggggagggt
gtcttgtga
DBGET
integrated database retrieval system
