Paenibacillus thiaminolyticus: NDS46_17300
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Entry
NDS46_17300 CDS
T08812
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pthi
Paenibacillus thiaminolyticus
Pathway
pthi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NDS46_17300 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pthi03400
]
NDS46_17300 (mutS)
DNA repair and recombination proteins [BR:
pthi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NDS46_17300 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
AAA_27
AAA_29
DUF5358
Rad17
Motif
Other DBs
NCBI-ProteinID:
WCF06117
LinkDB
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Position
complement(3811622..3814420)
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AA seq
932 aa
AA seq
DB search
MAKMTPMMEQYLAIKQQAEDAILFFRLGDFYEMFNDDAIVAAKELEITLTGRGSSGTEDR
IPMCGVPYHSADSYIQRLIEKGYRVAICEQMEDPSAAKGVVRREIVRIITPGTIMEGKMI
DEKANHYLLCLTEHEGMYALAACDLSTGEVTATSAPAGQSWLLDELNVYAPTEILGAERV
LDEARPVTKAWSKPVLFTPWTKRDETLAQRQFGEAAWMRLEPERRQALALLMSYLAETQK
RSLSQLTQVRTYEPDQYLVLDPFTRRNLELTETVRERAKKGSLLWLLDRTQTSMGGRLLR
RWIDKPLMNKRAIEARLEAVETLYHHMIWREDIREQLHQVYDLERLVSRIAFGTANGRDL
IALKHSLERVPGLKRCCAETDSATLRERVSGLDDCQDIVAWIDRAIVEEPPVSVRDGGII
KAGYDAHLDKLREASVNGKQWIAELERREREETGIKSLKVGYNKVFGYYIEVTRSNLQAL
PEGRYERKQTLANAERFITPELKEKEALILEAEDKMIGLEYDLFSQLRQRIGEQIRRLQT
LAEAIAEIDVYQSLAAVGAAHRFVRPEVTDGYDMHIEGGRHPVVEAVMESGSFMANDTVL
EEQSAGMLLITGPNMAGKSTYMRQVALMTILTQMGAFVPADRAVMPIVDRIFTRIGAADD
LIGGQSTFMVEMMDIQVMTAKATRRSLVIIDELGRGTSTSEGMSIAQAVIEFVHDEIGCK
ALVSTHFHELAHLEERLDGLRNVCMAVQESGNQVTFLRKLIPGAASTSYGIYCAKLAGLP
DSIIHRSYDLLKTYETGAPRETGETASADAGIAQAERQVLPDRVREQAESTPVAEEGAAR
GLVAEPGPVREAGTAASGAVEQLSLFGWEESAAASASAAPTAPVTKEEQRRNRQADVLIA
ELQEVDVLSLTPLEAMNALHAFMKRARGLKNE
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatgacgccgatgatggagcagtatttggcgattaagcagcaggcggaggat
gcgattttgtttttccgcctcggcgatttctatgaaatgttcaatgacgacgcaattgtg
gcggctaaggagctggagattacgctcaccggacggggcagcagcgggacggaagaccgg
atcccgatgtgcggcgttccgtatcattccgccgacagttacatacagcggctgatcgag
aaggggtaccgggtcgccatctgcgagcagatggaggatccgtcggccgcgaagggggtc
gtgcgccgcgagatcgtgcgcatcatcaccccgggcacgattatggaagggaagatgatt
gacgagaaggccaatcattatttgctctgcctgacggagcatgaaggcatgtatgccctg
gccgcctgcgatctgtcgaccggcgaggtgacggcgacgtccgccccggccggccagtct
tggctgctggacgagctgaacgtgtatgcgccgaccgagattctcggcgccgagcgagtg
ctggacgaggcgcggccggtgacgaaggcgtggagcaagccggttctgttcactccttgg
acgaagcgggatgagacgcttgctcagcggcaattcggcgaggctgcctggatgcggctc
gaaccggaacgccgtcaggcgctggcgctgctgatgtcgtatctggccgagacgcagaag
cgctcattgtctcagctgacccaggtgcggacgtacgagccggatcaatatctggtcctc
gatccgttcacgcgccgcaatctggagttgacggagacggtgcgcgagcgggcgaagaag
ggctcgctcctctggctgctcgatcggacgcagacgtcgatgggaggtcggctgctgcgc
cgctggattgacaagccgctcatgaacaagcgggcgatcgaggcgcggctcgaagcggtg
gagacgctgtatcatcatatgatctggcgggaggatatccgggagcagcttcatcaggta
tacgatctggagcgtctcgtaagccggattgcgttcggcaccgcgaacggccgcgatctg
atcgcgctgaagcattccttggagcgggtgccgggcttgaagcggtgctgcgcggagacc
gattcggcgacgctgcgcgagcgggtgtccggcctggacgactgccaggatatcgtggca
tggatcgatcgcgccatcgtcgaggaaccgcccgtgtcggtacgcgacggcggcatcatc
aaggcgggttatgacgcgcatttggacaagctgcgggaagcgagcgtgaacggcaagcag
tggatcgcggagctggaacgccgcgaacgggaagagacgggcatcaagtcgctgaaggtc
ggctataacaaagtgtttggctattatatcgaggttacccgatcgaatctgcaggcgctg
ccggagggccgctatgagcggaagcagacgttggcgaacgcagagaggttcattacgccg
gagctgaaggagaaggaagcgctcatcctggaagcggaagataaaatgatcgggctggaa
tacgatctgttcagtcaattgcgccagcgcatcggcgagcagatccggaggctgcagacg
ctggccgaggcgatcgcggagattgacgtgtatcagtcgctggcggcggtcggcgcggcg
caccgcttcgtccgtccggaggtcaccgacggctatgatatgcatatcgaaggcgggcgt
catccagtggtggaagcggtcatggagagcggctcgttcatggcgaacgacactgtgctg
gaggagcagtccgcaggcatgctgctcattaccgggccgaacatggccgggaagagcact
tatatgcgccaggtcgcgctgatgacgattttgacccagatgggcgccttcgtgccggcc
gatcgggcggtcatgccgatcgtcgatcggatcttcacccgcattggcgcggcggatgat
ctaattggcggccagagcaccttcatggtggagatgatggacatccaggtgatgactgcg
aaggcgacgcgccggagcttggttattatcgatgagctcggacggggaacgtcgacgagc
gaagggatgtcgattgctcaagccgtgatcgagttcgtgcacgacgagatcggctgcaag
gcgctcgtatcgacccatttccacgagctggcgcacctggaggaacggttggacggcttg
cgcaatgtctgtatggcggttcaggagagcgggaatcaagtaaccttcctgcggaagctg
attccgggagcggcgagcacaagctacggcatctactgcgcgaagctggccgggctgccg
gattcgattatccatcgctcctatgatctgttgaagacgtatgagacgggagcgccgcgg
gaaaccggggagacagcttcggctgacgcaggcatcgcacaggcggagcggcaggtactg
ccggatcgggtgcgggagcaggccgagtcgacgccggttgcagaggaaggcgcggccagg
gggttggttgcggagccggggccggttcgggaagcgggaacggccgcaagcggcgccgtc
gagcagctgtcgctgttcggctgggaggaatccgcggcggcttcggcttcggctgctcca
accgctccggtcacgaaggaggagcagcggcggaaccggcaggccgacgtgttgattgcc
gagctgcaggaggtcgatgtgctgtcgctcacgccgctcgaggcgatgaacgcgctgcac
gcgttcatgaagcgggcgcgcgggctgaagaacgaataa
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